Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC011406.1-201ENST00000512440 370 ntBASIC1.42□□□□□ -2.18
LIM2P55344 AC046134.1-201ENST00000514454 666 ntBASIC1.42□□□□□ -2.18
LIM2P55344 RNU7-175P-201ENST00000515915 61 ntBASIC1.42□□□□□ -2.18
LIM2P55344 RNU6-237P-201ENST00000515985 71 ntBASIC1.42□□□□□ -2.18
LIM2P55344 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.42□□□□□ -2.18
LIM2P55344 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.42□□□□□ -2.18
LIM2P55344 MIR4273-201ENST00000582824 84 ntBASIC1.42□□□□□ -2.18
LIM2P55344 AL645939.4-201ENST00000604495 135 ntBASIC1.42□□□□□ -2.18
LIM2P55344 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.42□□□□□ -2.18
LIM2P55344 AL353997.5-201ENST00000618886 171 ntBASIC1.42□□□□□ -2.18
LIM2P55344 AL078596.1-201ENST00000624856 447 ntBASIC1.42□□□□□ -2.18
LIM2P55344 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIM2P55344 MTND5P10-201ENST00000603719 1809 ntBASIC1.42□□□□□ -2.18
LIM2P55344 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LIM2P55344 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LIM2P55344 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.41□□□□□ -2.18
LIM2P55344 ZNF72P-201ENST00000425869 1908 ntBASIC1.41□□□□□ -2.18
LIM2P55344 Y_RNA.86-201ENST00000363020 111 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RNU6-457P-201ENST00000363999 107 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RNU6-296P-201ENST00000384608 107 ntBASIC1.41□□□□□ -2.18
LIM2P55344 MIR520A-201ENST00000384862 85 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RNU6-482P-201ENST00000391068 107 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RNU6-159P-201ENST00000391080 106 ntBASIC1.41□□□□□ -2.18
LIM2P55344 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
LIM2P55344 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LIM2P55344 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.41□□□□□ -2.18
LIM2P55344 MTND3P8-201ENST00000412909 339 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AC008134.1-201ENST00000420943 193 ntBASIC1.41□□□□□ -2.18
LIM2P55344 USMG5P1-201ENST00000425964 177 ntBASIC1.41□□□□□ -2.18
LIM2P55344 HSPE1P21-201ENST00000438283 308 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AC010409.1-201ENST00000487382 476 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AC025465.3-201ENST00000510570 311 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RNA5SP481-201ENST00000516814 122 ntBASIC1.41□□□□□ -2.18
LIM2P55344 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AL590705.4-201ENST00000532209 134 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AC015720.1-201ENST00000565251 277 ntBASIC1.41□□□□□ -2.18
LIM2P55344 MIR4790-201ENST00000577799 79 ntBASIC1.41□□□□□ -2.18
LIM2P55344 MIR5094-201ENST00000578766 85 ntBASIC1.41□□□□□ -2.18
LIM2P55344 MIR4742-201ENST00000581069 85 ntBASIC1.41□□□□□ -2.18
LIM2P55344 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
LIM2P55344 AC092794.1-201ENST00000612734 582 ntBASIC1.41□□□□□ -2.18
LIM2P55344 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.41□□□□□ -2.18
LIM2P55344 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.41□□□□□ -2.18
LIM2P55344 AC068205.3-201ENST00000636385 468 ntBASIC1.41□□□□□ -2.18
LIM2P55344 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.41□□□□□ -2.18
LIM2P55344 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
LIM2P55344 RNA5SP99-201ENST00000364020 114 ntBASIC1.4□□□□□ -2.19
LIM2P55344 RNU1-96P-201ENST00000364163 162 ntBASIC1.4□□□□□ -2.19
LIM2P55344 SNORA63D-201ENST00000364359 132 ntBASIC1.4□□□□□ -2.19
LIM2P55344 RNU6-418P-201ENST00000384035 107 ntBASIC1.4□□□□□ -2.19
LIM2P55344 MIR548K-201ENST00000408406 116 ntBASIC1.4□□□□□ -2.19
LIM2P55344 AC060773.1-201ENST00000421698 310 ntBASIC1.4□□□□□ -2.19
LIM2P55344 RPL31P63-201ENST00000422565 375 ntBASIC1.4□□□□□ -2.19
LIM2P55344 MTCO3P29-201ENST00000432119 779 ntBASIC1.4□□□□□ -2.19
LIM2P55344 AC099677.2-201ENST00000436385 175 ntBASIC1.4□□□□□ -2.19
LIM2P55344 Z82188.1-201ENST00000436709 154 ntBASIC1.4□□□□□ -2.19
LIM2P55344 Y_RNA.675-201ENST00000516389 149 ntBASIC1.4□□□□□ -2.19
LIM2P55344 RNU6-1016P-201ENST00000516689 94 ntBASIC1.4□□□□□ -2.19
LIM2P55344 SNORA31.17-201ENST00000516953 127 ntBASIC1.4□□□□□ -2.19
LIM2P55344 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.4□□□□□ -2.19
LIM2P55344 snoZ196.1-201ENST00000625269 89 ntBASIC1.4□□□□□ -2.19
LIM2P55344 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.4□□□□□ -2.19
LIM2P55344 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
LIM2P55344 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.19
LIM2P55344 AC010615.1-201ENST00000594254 1764 ntBASIC1.39□□□□□ -2.19
LIM2P55344 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.39□□□□□ -2.19
LIM2P55344 MTND4P12-201ENST00000498999 1377 ntBASIC1.39□□□□□ -2.19
LIM2P55344 snoU2-30.2-201ENST00000362805 70 ntBASIC1.39□□□□□ -2.19
LIM2P55344 U3.8-201ENST00000363675 217 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU4-13P-201ENST00000364019 141 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU6-1305P-201ENST00000364353 104 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU6-306P-201ENST00000384617 107 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU6-360P-201ENST00000390944 104 ntBASIC1.39□□□□□ -2.19
LIM2P55344 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
LIM2P55344 AC245047.4-201ENST00000433189 144 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU7-57P-201ENST00000459540 60 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU6-221P-201ENST00000459541 99 ntBASIC1.39□□□□□ -2.19
LIM2P55344 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.39□□□□□ -2.19
LIM2P55344 RNU6-273P-201ENST00000516937 96 ntBASIC1.39□□□□□ -2.19
LIM2P55344 AC024995.1-201ENST00000523014 93 ntBASIC1.39□□□□□ -2.19
LIM2P55344 MIR3124-201ENST00000582636 67 ntBASIC1.39□□□□□ -2.19
LIM2P55344 AC018462.2-201ENST00000605375 395 ntBASIC1.39□□□□□ -2.19
LIM2P55344 AC100812.1-201ENST00000607622 580 ntBASIC1.39□□□□□ -2.19
LIM2P55344 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
LIM2P55344 MIR338-201ENST00000636369 67 ntBASIC1.39□□□□□ -2.19
LIM2P55344 RNU6-862P-201ENST00000362804 105 ntBASIC1.38□□□□□ -2.19
LIM2P55344 Y_RNA.166-201ENST00000363730 102 ntBASIC1.38□□□□□ -2.19
LIM2P55344 RNU6-541P-201ENST00000384709 110 ntBASIC1.38□□□□□ -2.19
LIM2P55344 RNU1-139P-201ENST00000391307 165 ntBASIC1.38□□□□□ -2.19
LIM2P55344 RNA5SP504-201ENST00000410676 117 ntBASIC1.38□□□□□ -2.19
LIM2P55344 AC074085.1-201ENST00000413598 418 ntBASIC1.38□□□□□ -2.19
LIM2P55344 RPL21P111-201ENST00000418453 477 ntBASIC1.38□□□□□ -2.19
LIM2P55344 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.38□□□□□ -2.19
LIM2P55344 USP9YP30-201ENST00000430729 455 ntBASIC1.38□□□□□ -2.19
LIM2P55344 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.38□□□□□ -2.19
LIM2P55344 HMGB1P18-201ENST00000438801 619 ntBASIC1.38□□□□□ -2.19
LIM2P55344 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.38□□□□□ -2.19
LIM2P55344 AC093303.1-201ENST00000514549 295 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms