Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FAM157A-202ENST00000615155 405 ntBASIC1.04□□□□□ -2.24
CDH6P55285 AC097520.1-201ENST00000624435 385 ntBASIC1.04□□□□□ -2.24
CDH6P55285 AL078596.1-201ENST00000624856 447 ntBASIC1.04□□□□□ -2.24
CDH6P55285 Y_RNA.167-201ENST00000363735 109 ntBASIC1.03□□□□□ -2.24
CDH6P55285 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
CDH6P55285 RNA5SP109-201ENST00000391010 116 ntBASIC1.03□□□□□ -2.24
CDH6P55285 RPL21P1-201ENST00000399532 476 ntBASIC1.03□□□□□ -2.24
CDH6P55285 AC016909.1-201ENST00000415916 166 ntBASIC1.03□□□□□ -2.24
CDH6P55285 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
CDH6P55285 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH6P55285 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH6P55285 Y_RNA.638-201ENST00000459374 113 ntBASIC1.03□□□□□ -2.24
CDH6P55285 COX6CP14-201ENST00000469580 174 ntBASIC1.03□□□□□ -2.24
CDH6P55285 AC010486.3-201ENST00000511602 785 ntBASIC1.03□□□□□ -2.24
CDH6P55285 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.03□□□□□ -2.24
CDH6P55285 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH6P55285 MTND1P15-201ENST00000579262 949 ntBASIC1.03□□□□□ -2.24
CDH6P55285 MIR3611-201ENST00000584484 83 ntBASIC1.03□□□□□ -2.24
CDH6P55285 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
CDH6P55285 AC004492.1-201ENST00000607036 742 ntBASIC1.03□□□□□ -2.24
CDH6P55285 AC137590.2-201ENST00000619709 240 ntBASIC1.03□□□□□ -2.24
CDH6P55285 MIR6863-201ENST00000636112 90 ntBASIC1.03□□□□□ -2.24
CDH6P55285 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.25
CDH6P55285 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDH6P55285 RNU1-22P-201ENST00000363334 158 ntBASIC1.02□□□□□ -2.25
CDH6P55285 RNU6-784P-201ENST00000384330 106 ntBASIC1.02□□□□□ -2.25
CDH6P55285 MIR514A2-201ENST00000385131 88 ntBASIC1.02□□□□□ -2.25
CDH6P55285 MIR514A3-201ENST00000385132 88 ntBASIC1.02□□□□□ -2.25
CDH6P55285 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CDH6P55285 AC008134.1-201ENST00000420943 193 ntBASIC1.02□□□□□ -2.25
CDH6P55285 AC083904.1-201ENST00000487828 231 ntBASIC1.02□□□□□ -2.25
CDH6P55285 AC091885.1-201ENST00000506658 268 ntBASIC1.02□□□□□ -2.25
CDH6P55285 RNU6-835P-201ENST00000516974 104 ntBASIC1.02□□□□□ -2.25
CDH6P55285 CPDP1-201ENST00000579660 283 ntBASIC1.02□□□□□ -2.25
CDH6P55285 AL929325.1-201ENST00000603096 117 ntBASIC1.02□□□□□ -2.25
CDH6P55285 RN7SKP299-201ENST00000606679 301 ntBASIC1.02□□□□□ -2.25
CDH6P55285 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH6P55285 AC008873.1-201ENST00000625051 138 ntBASIC1.02□□□□□ -2.25
CDH6P55285 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDH6P55285 RNU6-1119P-201ENST00000384349 108 ntBASIC1.01□□□□□ -2.25
CDH6P55285 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AL356776.1-201ENST00000406574 447 ntBASIC1.01□□□□□ -2.25
CDH6P55285 RNU6-648P-201ENST00000410190 107 ntBASIC1.01□□□□□ -2.25
CDH6P55285 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.01□□□□□ -2.25
CDH6P55285 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH6P55285 DYNLT3P2-201ENST00000442517 295 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AL606517.2-201ENST00000442855 241 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.01□□□□□ -2.25
CDH6P55285 RNU7-187P-201ENST00000458985 68 ntBASIC1.01□□□□□ -2.25
CDH6P55285 RPL23AP75-201ENST00000491601 451 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.01□□□□□ -2.25
CDH6P55285 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH6P55285 SNORD116-28-201ENST00000516123 91 ntBASIC1.01□□□□□ -2.25
CDH6P55285 RNU1-142P-201ENST00000516682 145 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.01□□□□□ -2.25
CDH6P55285 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.01□□□□□ -2.25
CDH6P55285 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
CDH6P55285 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AC021506.2-201ENST00000612354 169 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AL158209.2-201ENST00000619266 216 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AC073534.2-201ENST00000620377 381 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
CDH6P55285 snoZ196.1-201ENST00000625269 89 ntBASIC1.01□□□□□ -2.25
CDH6P55285 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CDH6P55285 RNU6-1085P-201ENST00000363576 107 ntBASIC1□□□□□ -2.25
CDH6P55285 Y_RNA.231-201ENST00000364358 102 ntBASIC1□□□□□ -2.25
CDH6P55285 SNORA67.2-201ENST00000384300 149 ntBASIC1□□□□□ -2.25
CDH6P55285 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDH6P55285 AC010154.1-201ENST00000425857 269 ntBASIC1□□□□□ -2.25
CDH6P55285 HSPE1P13-201ENST00000451143 297 ntBASIC1□□□□□ -2.25
CDH6P55285 RPL39P38-201ENST00000467018 153 ntBASIC1□□□□□ -2.25
CDH6P55285 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1□□□□□ -2.25
CDH6P55285 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
CDH6P55285 HMGN1P7-201ENST00000491722 313 ntBASIC1□□□□□ -2.25
CDH6P55285 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
CDH6P55285 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1□□□□□ -2.25
CDH6P55285 RNU6-344P-201ENST00000516635 111 ntBASIC1□□□□□ -2.25
CDH6P55285 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
CDH6P55285 AC016957.1-201ENST00000534895 309 ntBASIC1□□□□□ -2.25
CDH6P55285 AC026371.1-201ENST00000551867 419 ntBASIC1□□□□□ -2.25
CDH6P55285 AC100830.2-201ENST00000581636 240 ntBASIC1□□□□□ -2.25
CDH6P55285 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1□□□□□ -2.25
CDH6P55285 AL133215.3-201ENST00000609801 448 ntBASIC1□□□□□ -2.25
CDH6P55285 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1□□□□□ -2.25
CDH6P55285 TTK-211ENST00000627129 240 ntTSL 5 BASIC1□□□□□ -2.25
CDH6P55285 MTND5P26-201ENST00000426018 1752 ntBASIC0.99□□□□□ -2.25
CDH6P55285 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDH6P55285 SNORD113-7-201ENST00000363762 77 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RNU6-522P-201ENST00000364497 107 ntBASIC0.99□□□□□ -2.25
CDH6P55285 Y_RNA.481-201ENST00000384373 102 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RNU6-790P-201ENST00000384479 105 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RNU6-1031P-201ENST00000384773 107 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AF228730.1-201ENST00000397972 663 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AL590002.1-201ENST00000406554 418 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RN7SKP200-201ENST00000410564 320 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RNU6-1068P-201ENST00000410958 103 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RPS27P1-201ENST00000450552 247 ntBASIC0.99□□□□□ -2.25
CDH6P55285 AC103851.1-201ENST00000506833 274 ntBASIC0.99□□□□□ -2.25
CDH6P55285 RNA5SP454-201ENST00000517231 127 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms