Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGCS2P54868 MIR5701-1-201ENST00000585138 82 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AC016727.2-201ENST00000603988 621 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AC113139.1-201ENST00000605049 239 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGCS2P54868 AC025253.1-201ENST00000613623 543 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 AL157834.3-201ENST00000615543 103 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 MIR5701-2-201ENST00000615634 82 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
HMGCS2P54868 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HMGCS2P54868 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HMGCS2P54868 Y_RNA.2-201ENST00000362330 96 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 Y_RNA.118-201ENST00000363300 101 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 SNORD115-32-201ENST00000364079 82 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 RNU4-9P-201ENST00000364951 139 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 MIR29C-201ENST00000385231 88 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HMGCS2P54868 RNU6-1009P-201ENST00000390996 107 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 MIR1262-201ENST00000408276 93 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 RNU6-370P-201ENST00000411008 104 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 AC004866.1-201ENST00000411748 78 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS2P54868 AC245102.2-201ENST00000448956 180 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 RPL23AP3-201ENST00000453844 468 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGCS2P54868 PRELID3BP1-201ENST00000457142 540 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS2P54868 RNU6-1098P-201ENST00000516772 96 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
HMGCS2P54868 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS2P54868 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.73□□□□□ -2.13
HMGCS2P54868 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 AL669831.3-213ENST00000636676 183 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 AC112487.2-201ENST00000637950 304 ntBASIC1.73□□□□□ -2.13
HMGCS2P54868 RNU1-76P-201ENST00000362903 159 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 SNORD116-29-201ENST00000384516 83 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 MIR1276-201ENST00000408707 83 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 Y_RNA.646-201ENST00000410980 101 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 MTCO3P29-201ENST00000432119 779 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 AL035666.1-201ENST00000446195 348 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 HMGN2P18-201ENST00000450680 270 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 snoU13.30-201ENST00000458951 104 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCS2P54868 SCARNA16.2-201ENST00000516520 172 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCS2P54868 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCS2P54868 FRG2DP-202ENST00000566967 323 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCS2P54868 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.72□□□□□ -2.13
HMGCS2P54868 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGCS2P54868 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HMGCS2P54868 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGCS2P54868 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.13
HMGCS2P54868 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.13
HMGCS2P54868 SNORD115-8-201ENST00000363856 82 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-743P-201ENST00000364151 106 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 SNORD115-38-201ENST00000365037 82 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-234P-201ENST00000365229 104 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 SNORA18.2-201ENST00000383865 132 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 Y_RNA.405-201ENST00000383979 100 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 Y_RNA.451-201ENST00000384200 100 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-17P-201ENST00000384245 107 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-18P-201ENST00000384527 107 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 Y_RNA.524-201ENST00000384564 100 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-310P-201ENST00000384655 107 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 Y_RNA.561-201ENST00000384694 100 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 MIR32-201ENST00000384965 70 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 MIR1304-201ENST00000408243 91 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGCS2P54868 USMG5P1-201ENST00000425964 177 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCS2P54868 TOMM22P6-201ENST00000465035 409 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AC093259.1-201ENST00000509755 300 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-120P-201ENST00000516077 103 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 RNU6-559P-201ENST00000516151 98 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGCS2P54868 AC093027.1-201ENST00000546698 429 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AC027288.2-201ENST00000553028 243 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AC090517.1-201ENST00000569307 266 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AL355375.2-201ENST00000574825 175 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCS2P54868 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGCS2P54868 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGCS2P54868 AL359314.1-201ENST00000616913 261 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGCS2P54868 MTND4LP32-201ENST00000636111 270 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 MIR1302-1-201ENST00000637932 143 ntBASIC1.71□□□□□ -2.14
HMGCS2P54868 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGCS2P54868 MIR340-201ENST00000362125 95 ntBASIC1.7□□□□□ -2.14
HMGCS2P54868 Y_RNA.387-201ENST00000383918 102 ntBASIC1.7□□□□□ -2.14
HMGCS2P54868 Y_RNA.490-201ENST00000384413 102 ntBASIC1.7□□□□□ -2.14
HMGCS2P54868 SNORA12.2-201ENST00000391040 156 ntBASIC1.7□□□□□ -2.14
HMGCS2P54868 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGCS2P54868 AC244636.1-201ENST00000421152 228 ntBASIC1.7□□□□□ -2.14
HMGCS2P54868 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGCS2P54868 AC093019.1-201ENST00000443135 252 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms