Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Y_RNA.188-201ENST00000363952 111 ntBASIC2.62□□□□□ -1.99
COPB1P53618 SNORD32B-201ENST00000364460 84 ntBASIC2.62□□□□□ -1.99
COPB1P53618 Y_RNA.307-201ENST00000365022 117 ntBASIC2.62□□□□□ -1.99
COPB1P53618 Y_RNA.462-201ENST00000384268 102 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AL513477.1-202ENST00000417061 214 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.62□□□□□ -1.99
COPB1P53618 AC005002.2-201ENST00000438228 269 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AC108938.1-201ENST00000451204 136 ntBASIC2.62□□□□□ -1.99
COPB1P53618 RNU6-1132P-201ENST00000459214 107 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.62□□□□□ -1.99
COPB1P53618 Y_RNA.683-201ENST00000516508 93 ntBASIC2.62□□□□□ -1.99
COPB1P53618 RNU6-570P-201ENST00000517051 105 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AC233702.2-202ENST00000562547 291 ntBASIC2.62□□□□□ -1.99
COPB1P53618 SNRPGP20-201ENST00000604477 205 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AP001282.2-201ENST00000616149 309 ntBASIC2.62□□□□□ -1.99
COPB1P53618 U4.3-201ENST00000621047 82 ntBASIC2.62□□□□□ -1.99
COPB1P53618 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COPB1P53618 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
COPB1P53618 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.62□□□□□ -1.99
COPB1P53618 AC010615.1-201ENST00000594254 1764 ntBASIC2.61□□□□□ -1.99
COPB1P53618 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COPB1P53618 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COPB1P53618 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
COPB1P53618 RNU6-793P-201ENST00000384233 104 ntBASIC2.61□□□□□ -1.99
COPB1P53618 Y_RNA.562-201ENST00000384695 113 ntBASIC2.61□□□□□ -1.99
COPB1P53618 Y_RNA.581-201ENST00000391017 97 ntBASIC2.61□□□□□ -1.99
COPB1P53618 Y_RNA.595-201ENST00000410403 105 ntBASIC2.61□□□□□ -1.99
COPB1P53618 RPL30P4-201ENST00000429309 333 ntBASIC2.61□□□□□ -1.99
COPB1P53618 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
COPB1P53618 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.61□□□□□ -1.99
COPB1P53618 AL513328.1-201ENST00000446460 224 ntBASIC2.61□□□□□ -1.99
COPB1P53618 TRBVB-201ENST00000477100 408 ntBASIC2.61□□□□□ -1.99
COPB1P53618 MTND1P19-201ENST00000511780 315 ntBASIC2.61□□□□□ -1.99
COPB1P53618 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.61□□□□□ -1.99
COPB1P53618 CYCSP23-201ENST00000519781 313 ntBASIC2.61□□□□□ -1.99
COPB1P53618 AC027176.1-201ENST00000560204 514 ntBASIC2.61□□□□□ -1.99
COPB1P53618 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.61□□□□□ -1.99
COPB1P53618 AC026470.2-201ENST00000561492 181 ntBASIC2.61□□□□□ -1.99
COPB1P53618 RNU6-626P-201ENST00000363354 107 ntBASIC2.6□□□□□ -1.99
COPB1P53618 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
COPB1P53618 SNORA12-201ENST00000391162 147 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AL359511.1-201ENST00000402970 211 ntBASIC2.6□□□□□ -1.99
COPB1P53618 MIR1261-201ENST00000408659 82 ntBASIC2.6□□□□□ -1.99
COPB1P53618 ELOCP21-201ENST00000412558 336 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.6□□□□□ -1.99
COPB1P53618 AC139712.2-201ENST00000424302 339 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AC027124.2-201ENST00000428249 105 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.6□□□□□ -1.99
COPB1P53618 AC073901.1-201ENST00000462471 408 ntBASIC2.6□□□□□ -1.99
COPB1P53618 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.6□□□□□ -1.99
COPB1P53618 AC074133.1-201ENST00000515696 183 ntBASIC2.6□□□□□ -1.99
COPB1P53618 RNU6-496P-201ENST00000516145 99 ntBASIC2.6□□□□□ -1.99
COPB1P53618 Y_RNA.680-201ENST00000516441 93 ntBASIC2.6□□□□□ -1.99
COPB1P53618 RNU6-1271P-201ENST00000517049 105 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AK6P2-201ENST00000549020 471 ntBASIC2.6□□□□□ -1.99
COPB1P53618 RRN3P3-201ENST00000549207 578 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.6□□□□□ -1.99
COPB1P53618 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AC005562.2-201ENST00000618264 111 ntBASIC2.6□□□□□ -1.99
COPB1P53618 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.6□□□□□ -1.99
COPB1P53618 U6.104-201ENST00000637979 90 ntBASIC2.6□□□□□ -1.99
COPB1P53618 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
COPB1P53618 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COPB1P53618 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COPB1P53618 SNORA18.2-201ENST00000383865 132 ntBASIC2.59□□□□□ -1.99
COPB1P53618 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
COPB1P53618 RNU6-20P-201ENST00000384106 107 ntBASIC2.59□□□□□ -1.99
COPB1P53618 Y_RNA.447-201ENST00000384184 113 ntBASIC2.59□□□□□ -1.99
COPB1P53618 U6atac.2-201ENST00000408644 118 ntBASIC2.59□□□□□ -1.99
COPB1P53618 RNU2-38P-201ENST00000410856 79 ntBASIC2.59□□□□□ -1.99
COPB1P53618 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.59□□□□□ -1.99
COPB1P53618 AC004386.2-201ENST00000441858 148 ntBASIC2.59□□□□□ -1.99
COPB1P53618 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.59□□□□□ -1.99
COPB1P53618 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.59□□□□□ -1.99
COPB1P53618 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
COPB1P53618 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.59□□□□□ -1.99
COPB1P53618 AC091544.4-201ENST00000555268 342 ntBASIC2.59□□□□□ -1.99
COPB1P53618 AL713866.2-201ENST00000603579 219 ntBASIC2.59□□□□□ -1.99
COPB1P53618 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.59□□□□□ -1.99
COPB1P53618 TCL6_2.1-201ENST00000615162 119 ntBASIC2.59□□□□□ -1.99
COPB1P53618 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COPB1P53618 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
COPB1P53618 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COPB1P53618 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
COPB1P53618 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COPB1P53618 Y_RNA.14-201ENST00000362415 103 ntBASIC2.58□□□□□ -2
COPB1P53618 SNORD81.1-201ENST00000363064 77 ntBASIC2.58□□□□□ -2
COPB1P53618 SNORD113-8-201ENST00000363497 74 ntBASIC2.58□□□□□ -2
COPB1P53618 RNU6-379P-201ENST00000363813 104 ntBASIC2.58□□□□□ -2
COPB1P53618 SNORA70B-201ENST00000384210 135 ntBASIC2.58□□□□□ -2
COPB1P53618 RNU6-102P-201ENST00000384485 104 ntBASIC2.58□□□□□ -2
COPB1P53618 Y_RNA.541-201ENST00000384640 113 ntBASIC2.58□□□□□ -2
COPB1P53618 Y_RNA.570-201ENST00000384750 101 ntBASIC2.58□□□□□ -2
COPB1P53618 MIR29B2-201ENST00000385055 81 ntBASIC2.58□□□□□ -2
COPB1P53618 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
COPB1P53618 MIR320B2-201ENST00000408479 138 ntBASIC2.58□□□□□ -2
COPB1P53618 RNA5SP504-201ENST00000410676 117 ntBASIC2.58□□□□□ -2
COPB1P53618 AC096920.1-201ENST00000423991 241 ntBASIC2.58□□□□□ -2
COPB1P53618 IFNA11P-201ENST00000446352 526 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms