Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2□□□□□ -2.09
LBX1P52954 RNU4-79P-201ENST00000362764 141 ntBASIC2□□□□□ -2.09
LBX1P52954 U3.9-201ENST00000363823 204 ntBASIC2□□□□□ -2.09
LBX1P52954 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
LBX1P52954 RNA5SP494-201ENST00000410653 129 ntBASIC2□□□□□ -2.09
LBX1P52954 MTCO3P10-201ENST00000455912 772 ntBASIC2□□□□□ -2.09
LBX1P52954 RPS29P1-201ENST00000465274 159 ntBASIC2□□□□□ -2.09
LBX1P52954 AC097473.1-201ENST00000508142 408 ntBASIC2□□□□□ -2.09
LBX1P52954 SCARNA16.2-201ENST00000516520 172 ntBASIC2□□□□□ -2.09
LBX1P52954 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2□□□□□ -2.09
LBX1P52954 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2□□□□□ -2.09
LBX1P52954 AL355297.2-201ENST00000604792 129 ntBASIC2□□□□□ -2.09
LBX1P52954 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2□□□□□ -2.09
LBX1P52954 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2□□□□□ -2.09
LBX1P52954 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2□□□□□ -2.09
LBX1P52954 AC104985.2-201ENST00000620598 500 ntBASIC2□□□□□ -2.09
LBX1P52954 IST1-227ENST00000626438 126 ntTSL 5 BASIC2□□□□□ -2.09
LBX1P52954 MIR1248-201ENST00000629190 106 ntBASIC2□□□□□ -2.09
LBX1P52954 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
LBX1P52954 RNU6-874P-201ENST00000362390 105 ntBASIC1.99□□□□□ -2.09
LBX1P52954 RNU6-137P-201ENST00000363680 108 ntBASIC1.99□□□□□ -2.09
LBX1P52954 RNU6-60P-201ENST00000364792 103 ntBASIC1.99□□□□□ -2.09
LBX1P52954 RNU6-546P-201ENST00000383991 107 ntBASIC1.99□□□□□ -2.09
LBX1P52954 RNU6-611P-201ENST00000384276 104 ntBASIC1.99□□□□□ -2.09
LBX1P52954 MIR559-201ENST00000385188 96 ntBASIC1.99□□□□□ -2.09
LBX1P52954 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
LBX1P52954 SNORA12.2-201ENST00000391040 156 ntBASIC1.99□□□□□ -2.09
LBX1P52954 RNU2-32P-201ENST00000411193 191 ntBASIC1.99□□□□□ -2.09
LBX1P52954 WARS2P1-201ENST00000429678 537 ntBASIC1.99□□□□□ -2.09
LBX1P52954 MTCO3P29-201ENST00000432119 779 ntBASIC1.99□□□□□ -2.09
LBX1P52954 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.99□□□□□ -2.09
LBX1P52954 snoU13.30-201ENST00000458951 104 ntBASIC1.99□□□□□ -2.09
LBX1P52954 RNU1-92P-201ENST00000517017 135 ntBASIC1.99□□□□□ -2.09
LBX1P52954 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.99□□□□□ -2.09
LBX1P52954 CYCSP26-201ENST00000534107 320 ntBASIC1.99□□□□□ -2.09
LBX1P52954 MIR4421-201ENST00000578133 69 ntBASIC1.99□□□□□ -2.09
LBX1P52954 AC016727.2-201ENST00000603988 621 ntBASIC1.99□□□□□ -2.09
LBX1P52954 AC022202.1-201ENST00000613515 211 ntBASIC1.99□□□□□ -2.09
LBX1P52954 AC063943.3-201ENST00000615562 356 ntBASIC1.99□□□□□ -2.09
LBX1P52954 AC137590.2-201ENST00000619709 240 ntBASIC1.99□□□□□ -2.09
LBX1P52954 BX322639.1-202ENST00000423987 2213 ntBASIC1.98□□□□□ -2.09
LBX1P52954 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LBX1P52954 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LBX1P52954 RNU6-1115P-201ENST00000362490 106 ntBASIC1.98□□□□□ -2.09
LBX1P52954 SNORA6-201ENST00000384033 151 ntBASIC1.98□□□□□ -2.09
LBX1P52954 RNU6-890P-201ENST00000384121 107 ntBASIC1.98□□□□□ -2.09
LBX1P52954 RNU6-331P-201ENST00000384724 107 ntBASIC1.98□□□□□ -2.09
LBX1P52954 MIR520E-201ENST00000384867 87 ntBASIC1.98□□□□□ -2.09
LBX1P52954 MIR208B-201ENST00000401172 77 ntBASIC1.98□□□□□ -2.09
LBX1P52954 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.98□□□□□ -2.09
LBX1P52954 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.98□□□□□ -2.09
LBX1P52954 AL590705.4-201ENST00000532209 134 ntBASIC1.98□□□□□ -2.09
LBX1P52954 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.98□□□□□ -2.09
LBX1P52954 AC005899.2-201ENST00000584353 90 ntBASIC1.98□□□□□ -2.09
LBX1P52954 RPL17P51-201ENST00000605218 238 ntBASIC1.98□□□□□ -2.09
LBX1P52954 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
LBX1P52954 MTND4LP32-201ENST00000636111 270 ntBASIC1.98□□□□□ -2.09
LBX1P52954 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LBX1P52954 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LBX1P52954 AC006026.1-201ENST00000444025 1803 ntBASIC1.97□□□□□ -2.09
LBX1P52954 MIR340-201ENST00000362125 95 ntBASIC1.97□□□□□ -2.09
LBX1P52954 Y_RNA.48-201ENST00000362710 103 ntBASIC1.97□□□□□ -2.09
LBX1P52954 Y_RNA.68-201ENST00000362881 102 ntBASIC1.97□□□□□ -2.09
LBX1P52954 RNU6-234P-201ENST00000365229 104 ntBASIC1.97□□□□□ -2.09
LBX1P52954 Y_RNA.356-201ENST00000365475 113 ntBASIC1.97□□□□□ -2.09
LBX1P52954 RNU1-139P-201ENST00000391307 165 ntBASIC1.97□□□□□ -2.09
LBX1P52954 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.97□□□□□ -2.09
LBX1P52954 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.97□□□□□ -2.09
LBX1P52954 RNA5SP137-201ENST00000516833 135 ntBASIC1.97□□□□□ -2.09
LBX1P52954 RNU6-667P-201ENST00000517186 102 ntBASIC1.97□□□□□ -2.09
LBX1P52954 AC026470.2-201ENST00000561492 181 ntBASIC1.97□□□□□ -2.09
LBX1P52954 AC084781.2-201ENST00000615568 161 ntBASIC1.97□□□□□ -2.09
LBX1P52954 AC091925.1-201ENST00000623204 462 ntBASIC1.97□□□□□ -2.09
LBX1P52954 AC012640.5-201ENST00000623897 319 ntBASIC1.97□□□□□ -2.09
LBX1P52954 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
LBX1P52954 MIRLET7G-201ENST00000362280 84 ntBASIC1.96□□□□□ -2.1
LBX1P52954 RNY1P16-201ENST00000363063 111 ntBASIC1.96□□□□□ -2.1
LBX1P52954 RNU6-26P-201ENST00000383985 107 ntBASIC1.96□□□□□ -2.1
LBX1P52954 MIR153-2-201ENST00000385225 87 ntBASIC1.96□□□□□ -2.1
LBX1P52954 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LBX1P52954 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.96□□□□□ -2.1
LBX1P52954 AC005534.2-201ENST00000431047 433 ntBASIC1.96□□□□□ -2.1
LBX1P52954 Y_RNA.653-201ENST00000459091 95 ntBASIC1.96□□□□□ -2.1
LBX1P52954 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
LBX1P52954 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.96□□□□□ -2.1
LBX1P52954 SNORA4.4-201ENST00000515921 135 ntBASIC1.96□□□□□ -2.1
LBX1P52954 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.96□□□□□ -2.1
LBX1P52954 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.96□□□□□ -2.1
LBX1P52954 MIR4273-201ENST00000582824 84 ntBASIC1.96□□□□□ -2.1
LBX1P52954 MIR4795-201ENST00000584182 89 ntBASIC1.96□□□□□ -2.1
LBX1P52954 AC008873.1-201ENST00000625051 138 ntBASIC1.96□□□□□ -2.1
LBX1P52954 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LBX1P52954 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LBX1P52954 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms