Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SNORA67.2-201ENST00000384300 149 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 MIR454-201ENST00000390180 115 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 U8.16-201ENST00000391279 133 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 MTCYBP10-201ENST00000424905 650 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AC004854.1-201ENST00000440356 349 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AC104332.1-201ENST00000440471 797 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.14□□□□□ -2.39
NKX2-5P52952 Y_RNA.676-201ENST00000516393 96 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AC087854.1-201ENST00000519706 414 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 RNU6-323P-201ENST00000521915 107 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AC016957.1-201ENST00000534895 309 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.14□□□□□ -2.39
NKX2-5P52952 MIR4775-201ENST00000581168 75 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AC018714.1-201ENST00000605028 208 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 AL133173.2-201ENST00000614270 90 ntBASIC0.14□□□□□ -2.39
NKX2-5P52952 RNU5B-2P-201ENST00000363036 113 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 Y_RNA.226-201ENST00000364337 114 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 Y_RNA.265-201ENST00000364677 108 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 RNU1-139P-201ENST00000391307 165 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 MTCO2P3-201ENST00000442543 421 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC093850.1-201ENST00000454121 251 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 snoU13.25-201ENST00000458945 104 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 snoU109.3-201ENST00000459477 145 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC007215.1-201ENST00000464893 276 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 RNU7-12P-201ENST00000516030 62 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 Vault.3-201ENST00000516676 95 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 MIR4999-201ENST00000585029 91 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC112191.3-201ENST00000604371 277 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC092354.1-201ENST00000606057 376 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC007014.2-201ENST00000615581 479 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 AC006927.3-201ENST00000638789 384 ntBASIC0.13□□□□□ -2.39
NKX2-5P52952 Y_RNA.354-201ENST00000365448 111 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 RNY1P14-201ENST00000384426 108 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 MIR140-201ENST00000385282 100 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 MIR1287-201ENST00000408492 90 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 USP9YP12-201ENST00000450481 570 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.12□□□□□ -2.39
NKX2-5P52952 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.12□□□□□ -2.39
NKX2-5P52952 RNA5SP220-201ENST00000516298 104 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 RNU6-344P-201ENST00000516635 111 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 RNU7-28P-201ENST00000516759 62 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.12□□□□□ -2.39
NKX2-5P52952 AL157392.4-201ENST00000609756 345 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 AC022709.1-201ENST00000615967 87 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 AC027807.2-201ENST00000616099 408 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 RMST_2.1-201ENST00000617263 136 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 MIR6734-201ENST00000621166 68 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 AC099654.13-201ENST00000639774 207 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 MTND4P9-201ENST00000507819 1346 ntBASIC0.12□□□□□ -2.39
NKX2-5P52952 RNU6-227P-201ENST00000362865 103 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 Y_RNA.238-201ENST00000364441 102 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 AL663109.1-201ENST00000411498 844 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.11□□□□□ -2.39
NKX2-5P52952 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.11□□□□□ -2.39
NKX2-5P52952 AC104850.1-201ENST00000435940 476 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 MTCO3P23-201ENST00000561363 289 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 SNORA4-201ENST00000584302 138 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 RNU4-5P-201ENST00000607255 135 ntBASIC0.11□□□□□ -2.39
NKX2-5P52952 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
NKX2-5P52952 MIR103A2-201ENST00000362154 78 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 MIR103A1-201ENST00000362165 78 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 RNU6-1266P-201ENST00000362794 105 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 RNU6-1029P-201ENST00000384109 107 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 MRPS18CP6-201ENST00000423587 223 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.1□□□□□ -2.39
NKX2-5P52952 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.1□□□□□ -2.39
NKX2-5P52952 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.1□□□□□ -2.39
NKX2-5P52952 RPS20P10-201ENST00000451209 253 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.1□□□□□ -2.39
NKX2-5P52952 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.1□□□□□ -2.39
NKX2-5P52952 RNU6-612P-201ENST00000516909 102 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 AGGF1P4-201ENST00000568249 801 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 MIR3192-201ENST00000584920 77 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 RNU6-85P-201ENST00000605989 107 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 RNU6-94P-201ENST00000607728 107 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 AC091304.9-201ENST00000612091 226 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 AL589743.1-201ENST00000551932 2712 ntBASIC0.1□□□□□ -2.39
NKX2-5P52952 RNU5E-5P-201ENST00000365379 116 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 RNU6-1127P-201ENST00000384580 107 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 RNU2-70P-201ENST00000410718 179 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 GPR143P-201ENST00000434155 205 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.09□□□□□ -2.4
NKX2-5P52952 AL512286.1-201ENST00000439244 400 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.09□□□□□ -2.4
NKX2-5P52952 SNORD27.1-201ENST00000516319 72 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.09□□□□□ -2.4
NKX2-5P52952 BNIP3P39-201ENST00000601077 554 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 AC018645.2-201ENST00000609151 472 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.4
NKX2-5P52952 AL390237.1-201ENST00000404226 1415 ntBASIC0.09□□□□□ -2.4
NKX2-5P52952 Y_RNA.116-201ENST00000363292 103 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNU6-1286P-201ENST00000383871 107 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNU6-42P-201ENST00000384165 107 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 SNORD105-201ENST00000386910 85 ntBASIC0.08□□□□□ -2.4
NKX2-5P52952 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms