Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MIR487A-201ENST00000385009 80 ntBASIC1.58□□□□□ -2.16
SMSP52788 MIR549A-201ENST00000385268 96 ntBASIC1.58□□□□□ -2.16
SMSP52788 RNU6-174P-201ENST00000410406 106 ntBASIC1.58□□□□□ -2.16
SMSP52788 AP1B1P2-201ENST00000416196 106 ntBASIC1.58□□□□□ -2.16
SMSP52788 AC243428.1-201ENST00000421099 264 ntBASIC1.58□□□□□ -2.16
SMSP52788 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.58□□□□□ -2.16
SMSP52788 Z82188.1-201ENST00000436709 154 ntBASIC1.58□□□□□ -2.16
SMSP52788 MTND4LP16-201ENST00000440828 295 ntBASIC1.58□□□□□ -2.16
SMSP52788 MTND1P17-201ENST00000448961 204 ntBASIC1.58□□□□□ -2.16
SMSP52788 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
SMSP52788 HMGN1P13-201ENST00000505795 138 ntBASIC1.58□□□□□ -2.16
SMSP52788 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
SMSP52788 RNA5SP454-201ENST00000517231 127 ntBASIC1.58□□□□□ -2.16
SMSP52788 AC027288.2-201ENST00000553028 243 ntBASIC1.58□□□□□ -2.16
SMSP52788 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
SMSP52788 SNORA77B-201ENST00000578179 125 ntBASIC1.58□□□□□ -2.16
SMSP52788 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.58□□□□□ -2.16
SMSP52788 SNORD11B-201ENST00000607707 90 ntBASIC1.58□□□□□ -2.16
SMSP52788 AC126177.8-201ENST00000618339 1015 ntBASIC1.58□□□□□ -2.16
SMSP52788 AL078596.1-201ENST00000624856 447 ntBASIC1.58□□□□□ -2.16
SMSP52788 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.58□□□□□ -2.16
SMSP52788 MIR3662-201ENST00000637030 95 ntBASIC1.58□□□□□ -2.16
SMSP52788 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SMSP52788 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
SMSP52788 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
SMSP52788 snoU2-30.2-201ENST00000362805 70 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNU5F-3P-201ENST00000363767 117 ntBASIC1.57□□□□□ -2.16
SMSP52788 Y_RNA.490-201ENST00000384413 102 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNU4-62P-201ENST00000410125 130 ntBASIC1.57□□□□□ -2.16
SMSP52788 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.57□□□□□ -2.16
SMSP52788 Z82205.1-201ENST00000428456 297 ntBASIC1.57□□□□□ -2.16
SMSP52788 HSPE1P9-201ENST00000440046 311 ntBASIC1.57□□□□□ -2.16
SMSP52788 JTBP1-201ENST00000441314 247 ntBASIC1.57□□□□□ -2.16
SMSP52788 AC016717.1-201ENST00000448918 286 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNU7-57P-201ENST00000459540 60 ntBASIC1.57□□□□□ -2.16
SMSP52788 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
SMSP52788 RPL36AP21-201ENST00000490372 323 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNU6-566P-201ENST00000516790 107 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNU6-1088P-201ENST00000516850 104 ntBASIC1.57□□□□□ -2.16
SMSP52788 RNA5SP437-201ENST00000517249 129 ntBASIC1.57□□□□□ -2.16
SMSP52788 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.57□□□□□ -2.16
SMSP52788 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.57□□□□□ -2.16
SMSP52788 AC100810.6-201ENST00000638068 285 ntBASIC1.57□□□□□ -2.16
SMSP52788 Y_RNA.301-201ENST00000364990 103 ntBASIC1.56□□□□□ -2.16
SMSP52788 SNORA25.9-201ENST00000365087 128 ntBASIC1.56□□□□□ -2.16
SMSP52788 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SMSP52788 MIR1277-201ENST00000408536 78 ntBASIC1.56□□□□□ -2.16
SMSP52788 RNA5SP504-201ENST00000410676 117 ntBASIC1.56□□□□□ -2.16
SMSP52788 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.56□□□□□ -2.16
SMSP52788 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.56□□□□□ -2.16
SMSP52788 MTATP6P13-201ENST00000438531 667 ntBASIC1.56□□□□□ -2.16
SMSP52788 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.56□□□□□ -2.16
SMSP52788 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.56□□□□□ -2.16
SMSP52788 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
SMSP52788 RNU6-221P-201ENST00000459541 99 ntBASIC1.56□□□□□ -2.16
SMSP52788 AC005840.1-201ENST00000498412 377 ntBASIC1.56□□□□□ -2.16
SMSP52788 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.56□□□□□ -2.16
SMSP52788 DNAJC19P9-201ENST00000555084 351 ntBASIC1.56□□□□□ -2.16
SMSP52788 SNORA59B-202ENST00000578183 701 ntBASIC1.56□□□□□ -2.16
SMSP52788 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.56□□□□□ -2.16
SMSP52788 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
SMSP52788 7SK.7-201ENST00000603504 247 ntBASIC1.56□□□□□ -2.16
SMSP52788 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.56□□□□□ -2.16
SMSP52788 snoZ196.1-201ENST00000625269 89 ntBASIC1.56□□□□□ -2.16
SMSP52788 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.56□□□□□ -2.16
SMSP52788 RNU6-159P-201ENST00000391080 106 ntBASIC1.55□□□□□ -2.16
SMSP52788 SNORD115-47-201ENST00000391226 86 ntBASIC1.55□□□□□ -2.16
SMSP52788 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
SMSP52788 HMGN2P34-201ENST00000437647 269 ntBASIC1.55□□□□□ -2.16
SMSP52788 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.55□□□□□ -2.16
SMSP52788 SNORD5.1-201ENST00000458800 75 ntBASIC1.55□□□□□ -2.16
SMSP52788 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
SMSP52788 AC011352.1-201ENST00000512300 793 ntBASIC1.55□□□□□ -2.16
SMSP52788 AC024995.1-201ENST00000523014 93 ntBASIC1.55□□□□□ -2.16
SMSP52788 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.55□□□□□ -2.16
SMSP52788 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.55□□□□□ -2.16
SMSP52788 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
SMSP52788 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
SMSP52788 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.55□□□□□ -2.16
SMSP52788 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.55□□□□□ -2.16
SMSP52788 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.55□□□□□ -2.16
SMSP52788 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMSP52788 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SMSP52788 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SMSP52788 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SMSP52788 RNU6-595P-201ENST00000363944 107 ntBASIC1.54□□□□□ -2.16
SMSP52788 RNU6-280P-201ENST00000364145 104 ntBASIC1.54□□□□□ -2.16
SMSP52788 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
SMSP52788 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SMSP52788 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
SMSP52788 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
SMSP52788 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.54□□□□□ -2.16
SMSP52788 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.54□□□□□ -2.16
SMSP52788 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
SMSP52788 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
SMSP52788 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.54□□□□□ -2.16
SMSP52788 RPL30P10-201ENST00000488148 337 ntBASIC1.54□□□□□ -2.16
SMSP52788 SNORA25.14-201ENST00000516481 132 ntBASIC1.54□□□□□ -2.16
SMSP52788 AC025647.1-201ENST00000517879 253 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms