Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-1301P-201ENST00000362724 104 ntBASIC2.45□□□□□ -2.02
NEK3P51956 Y_RNA.314-201ENST00000365114 102 ntBASIC2.45□□□□□ -2.02
NEK3P51956 Y_RNA.415-201ENST00000384012 112 ntBASIC2.45□□□□□ -2.02
NEK3P51956 Y_RNA.460-201ENST00000384255 102 ntBASIC2.45□□□□□ -2.02
NEK3P51956 SNORA48.1-201ENST00000390879 135 ntBASIC2.45□□□□□ -2.02
NEK3P51956 AC105758.1-201ENST00000506038 399 ntBASIC2.45□□□□□ -2.02
NEK3P51956 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
NEK3P51956 AC023442.1-201ENST00000531247 422 ntBASIC2.45□□□□□ -2.02
NEK3P51956 AC121758.2-201ENST00000553271 193 ntBASIC2.45□□□□□ -2.02
NEK3P51956 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.45□□□□□ -2.02
NEK3P51956 AC091925.1-201ENST00000623204 462 ntBASIC2.45□□□□□ -2.02
NEK3P51956 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.45□□□□□ -2.02
NEK3P51956 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
NEK3P51956 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NEK3P51956 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NEK3P51956 RNU6-727P-201ENST00000363592 107 ntBASIC2.44□□□□□ -2.02
NEK3P51956 Y_RNA.197-201ENST00000364004 102 ntBASIC2.44□□□□□ -2.02
NEK3P51956 SNORA16B-201ENST00000364674 135 ntBASIC2.44□□□□□ -2.02
NEK3P51956 MIR597-201ENST00000384968 97 ntBASIC2.44□□□□□ -2.02
NEK3P51956 MIR1185-2-201ENST00000408687 86 ntBASIC2.44□□□□□ -2.02
NEK3P51956 SNORA11.4-201ENST00000408823 129 ntBASIC2.44□□□□□ -2.02
NEK3P51956 PCNPP5-201ENST00000452246 481 ntBASIC2.44□□□□□ -2.02
NEK3P51956 AP005660.1-201ENST00000522972 293 ntBASIC2.44□□□□□ -2.02
NEK3P51956 AC021269.2-201ENST00000532318 330 ntBASIC2.44□□□□□ -2.02
NEK3P51956 AL442163.3-201ENST00000554110 156 ntBASIC2.44□□□□□ -2.02
NEK3P51956 AC091544.4-201ENST00000555268 342 ntBASIC2.44□□□□□ -2.02
NEK3P51956 MIR3684-201ENST00000579779 74 ntBASIC2.44□□□□□ -2.02
NEK3P51956 AC083806.3-201ENST00000614016 455 ntBASIC2.44□□□□□ -2.02
NEK3P51956 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NEK3P51956 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NEK3P51956 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
NEK3P51956 RNU4-42P-201ENST00000364738 142 ntBASIC2.43□□□□□ -2.02
NEK3P51956 SNORD87-201ENST00000364849 89 ntBASIC2.43□□□□□ -2.02
NEK3P51956 RNU6-1264P-201ENST00000383891 107 ntBASIC2.43□□□□□ -2.02
NEK3P51956 RNY3P4-201ENST00000384428 101 ntBASIC2.43□□□□□ -2.02
NEK3P51956 MIR17-201ENST00000385012 84 ntBASIC2.43□□□□□ -2.02
NEK3P51956 MIR548B-201ENST00000385247 97 ntBASIC2.43□□□□□ -2.02
NEK3P51956 Y_RNA.579-201ENST00000390939 94 ntBASIC2.43□□□□□ -2.02
NEK3P51956 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
NEK3P51956 MTCO3P19-201ENST00000415864 321 ntBASIC2.43□□□□□ -2.02
NEK3P51956 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.43□□□□□ -2.02
NEK3P51956 MRPS18CP6-201ENST00000423587 223 ntBASIC2.43□□□□□ -2.02
NEK3P51956 UQCRBP2-201ENST00000447827 297 ntBASIC2.43□□□□□ -2.02
NEK3P51956 U8.22-201ENST00000459141 133 ntBASIC2.43□□□□□ -2.02
NEK3P51956 SNORD53-201ENST00000579969 78 ntBASIC2.43□□□□□ -2.02
NEK3P51956 VN1R91P-201ENST00000594377 169 ntBASIC2.43□□□□□ -2.02
NEK3P51956 AC005034.5-201ENST00000604219 466 ntBASIC2.43□□□□□ -2.02
NEK3P51956 AL080274.1-201ENST00000605565 220 ntBASIC2.43□□□□□ -2.02
NEK3P51956 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
NEK3P51956 U2.1-201ENST00000618978 145 ntBASIC2.43□□□□□ -2.02
NEK3P51956 AC090574.1-201ENST00000623186 233 ntBASIC2.43□□□□□ -2.02
NEK3P51956 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
NEK3P51956 ZNF702P-202ENST00000434269 1966 ntBASIC2.43□□□□□ -2.02
NEK3P51956 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.43□□□□□ -2.02
NEK3P51956 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
NEK3P51956 MIR410-201ENST00000362222 80 ntBASIC2.42□□□□□ -2.02
NEK3P51956 Y_RNA.395-201ENST00000383945 109 ntBASIC2.42□□□□□ -2.02
NEK3P51956 RNU6-318P-201ENST00000384283 103 ntBASIC2.42□□□□□ -2.02
NEK3P51956 MIR515-2-201ENST00000384883 83 ntBASIC2.42□□□□□ -2.02
NEK3P51956 MIR515-1-201ENST00000384884 83 ntBASIC2.42□□□□□ -2.02
NEK3P51956 MIR628-201ENST00000385229 95 ntBASIC2.42□□□□□ -2.02
NEK3P51956 RNU4-53P-201ENST00000410828 140 ntBASIC2.42□□□□□ -2.02
NEK3P51956 RNU6-57P-201ENST00000411348 103 ntBASIC2.42□□□□□ -2.02
NEK3P51956 RPS20P15-201ENST00000412792 311 ntBASIC2.42□□□□□ -2.02
NEK3P51956 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NEK3P51956 AC096920.1-201ENST00000423991 241 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AC016717.1-201ENST00000448918 286 ntBASIC2.42□□□□□ -2.02
NEK3P51956 RPL23AP3-201ENST00000453844 468 ntBASIC2.42□□□□□ -2.02
NEK3P51956 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
NEK3P51956 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.42□□□□□ -2.02
NEK3P51956 RNA5SP233-201ENST00000459153 113 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AC027575.1-201ENST00000481064 460 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AC011406.1-201ENST00000512440 370 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AL109918.3-201ENST00000603072 338 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AL050343.2-201ENST00000607338 280 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
NEK3P51956 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
NEK3P51956 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.42□□□□□ -2.02
NEK3P51956 SDR42E1P4-201ENST00000620894 481 ntBASIC2.42□□□□□ -2.02
NEK3P51956 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
NEK3P51956 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.42□□□□□ -2.02
NEK3P51956 AC016717.2-201ENST00000609089 5141 ntBASIC2.42□□□□□ -2.02
NEK3P51956 Y_RNA.112-201ENST00000363250 102 ntBASIC2.41□□□□□ -2.02
NEK3P51956 RNA5SP501-201ENST00000410990 112 ntBASIC2.41□□□□□ -2.02
NEK3P51956 AC018865.2-201ENST00000423631 129 ntBASIC2.41□□□□□ -2.02
NEK3P51956 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.41□□□□□ -2.02
NEK3P51956 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.41□□□□□ -2.02
NEK3P51956 HMGN1P13-201ENST00000505795 138 ntBASIC2.41□□□□□ -2.02
NEK3P51956 AC025647.1-201ENST00000517879 253 ntBASIC2.41□□□□□ -2.02
NEK3P51956 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.41□□□□□ -2.02
NEK3P51956 AK6P2-201ENST00000549020 471 ntBASIC2.41□□□□□ -2.02
NEK3P51956 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.41□□□□□ -2.02
NEK3P51956 MIR4287-201ENST00000579398 78 ntBASIC2.41□□□□□ -2.02
NEK3P51956 AL160413.1-201ENST00000622780 310 ntBASIC2.41□□□□□ -2.02
NEK3P51956 AC138305.3-201ENST00000624988 240 ntBASIC2.41□□□□□ -2.02
NEK3P51956 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEK3P51956 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NEK3P51956 Y_RNA.39-201ENST00000362620 98 ntBASIC2.4□□□□□ -2.03
NEK3P51956 RNA5SP361-201ENST00000362686 118 ntBASIC2.4□□□□□ -2.03
NEK3P51956 RNU6-1266P-201ENST00000362794 105 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms