Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 Y_RNA.451-201ENST00000384200 100 ntBASIC2.31□□□□□ -2.04
CTCFP49711 RNU6-1297P-201ENST00000384415 104 ntBASIC2.31□□□□□ -2.04
CTCFP49711 SNORD116-29-201ENST00000384516 83 ntBASIC2.31□□□□□ -2.04
CTCFP49711 Y_RNA.524-201ENST00000384564 100 ntBASIC2.31□□□□□ -2.04
CTCFP49711 Y_RNA.561-201ENST00000384694 100 ntBASIC2.31□□□□□ -2.04
CTCFP49711 MIR17-201ENST00000385012 84 ntBASIC2.31□□□□□ -2.04
CTCFP49711 MIR153-2-201ENST00000385225 87 ntBASIC2.31□□□□□ -2.04
CTCFP49711 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
CTCFP49711 SNORA12.2-201ENST00000391040 156 ntBASIC2.31□□□□□ -2.04
CTCFP49711 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.31□□□□□ -2.04
CTCFP49711 HMGN2P18-201ENST00000450680 270 ntBASIC2.31□□□□□ -2.04
CTCFP49711 RNA5SP233-201ENST00000459153 113 ntBASIC2.31□□□□□ -2.04
CTCFP49711 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
CTCFP49711 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
CTCFP49711 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
CTCFP49711 AL031274.2-201ENST00000599419 203 ntBASIC2.31□□□□□ -2.04
CTCFP49711 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.31□□□□□ -2.04
CTCFP49711 AL008636.1-201ENST00000625038 1018 ntBASIC2.31□□□□□ -2.04
CTCFP49711 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.31□□□□□ -2.04
CTCFP49711 BX322639.1-202ENST00000423987 2213 ntBASIC2.3□□□□□ -2.04
CTCFP49711 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CTCFP49711 RNY1P16-201ENST00000363063 111 ntBASIC2.3□□□□□ -2.04
CTCFP49711 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
CTCFP49711 RNU6-342P-201ENST00000384521 104 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AL357139.1-201ENST00000407792 426 ntBASIC2.3□□□□□ -2.04
CTCFP49711 RNU2-40P-201ENST00000410833 196 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.3□□□□□ -2.04
CTCFP49711 AL353997.1-201ENST00000432936 108 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC097473.1-201ENST00000508142 408 ntBASIC2.3□□□□□ -2.04
CTCFP49711 RNU7-175P-201ENST00000515915 61 ntBASIC2.3□□□□□ -2.04
CTCFP49711 RNU5F-4P-201ENST00000516581 114 ntBASIC2.3□□□□□ -2.04
CTCFP49711 RNU6-58P-201ENST00000517143 103 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.3□□□□□ -2.04
CTCFP49711 AC093027.1-201ENST00000546698 429 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.3□□□□□ -2.04
CTCFP49711 MIR5690-201ENST00000583739 73 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC005899.2-201ENST00000584353 90 ntBASIC2.3□□□□□ -2.04
CTCFP49711 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AL109918.3-201ENST00000603072 338 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC022709.1-201ENST00000615967 87 ntBASIC2.3□□□□□ -2.04
CTCFP49711 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.3□□□□□ -2.04
CTCFP49711 PVT1_3.1-201ENST00000620853 95 ntBASIC2.3□□□□□ -2.04
CTCFP49711 MTND4LP32-201ENST00000636111 270 ntBASIC2.3□□□□□ -2.04
CTCFP49711 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CTCFP49711 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
CTCFP49711 SNORA16B-201ENST00000364674 135 ntBASIC2.29□□□□□ -2.04
CTCFP49711 Y_RNA.319-201ENST00000365138 92 ntBASIC2.29□□□□□ -2.04
CTCFP49711 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
CTCFP49711 SNORA75.6-201ENST00000391318 127 ntBASIC2.29□□□□□ -2.04
CTCFP49711 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.29□□□□□ -2.04
CTCFP49711 AC245102.2-201ENST00000448956 180 ntBASIC2.29□□□□□ -2.04
CTCFP49711 MTCO3P10-201ENST00000455912 772 ntBASIC2.29□□□□□ -2.04
CTCFP49711 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.29□□□□□ -2.04
CTCFP49711 7SK.7-201ENST00000603504 247 ntBASIC2.29□□□□□ -2.04
CTCFP49711 AL355802.3-201ENST00000607571 545 ntBASIC2.29□□□□□ -2.04
CTCFP49711 TCL6_2.1-201ENST00000615162 119 ntBASIC2.29□□□□□ -2.04
CTCFP49711 AL359314.1-201ENST00000616913 261 ntBASIC2.29□□□□□ -2.04
CTCFP49711 AC084768.2-201ENST00000622736 221 ntBASIC2.29□□□□□ -2.04
CTCFP49711 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CTCFP49711 MTND4P1-201ENST00000457501 1466 ntBASIC2.28□□□□□ -2.04
CTCFP49711 ZNF204P-201ENST00000416749 2397 ntBASIC2.28□□□□□ -2.04
CTCFP49711 Y_RNA.332-201ENST00000365271 113 ntBASIC2.28□□□□□ -2.04
CTCFP49711 Y_RNA.384-201ENST00000383909 102 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNY4P36-201ENST00000391116 96 ntBASIC2.28□□□□□ -2.04
CTCFP49711 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.28□□□□□ -2.04
CTCFP49711 MTCYBP4-201ENST00000401524 249 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
CTCFP49711 AL139156.1-201ENST00000412785 841 ntBASIC2.28□□□□□ -2.04
CTCFP49711 AL356379.1-201ENST00000414105 126 ntBASIC2.28□□□□□ -2.04
CTCFP49711 AC004386.2-201ENST00000441858 148 ntBASIC2.28□□□□□ -2.04
CTCFP49711 SNRPEP8-201ENST00000442866 260 ntBASIC2.28□□□□□ -2.04
CTCFP49711 MTCO3P8-201ENST00000453691 755 ntBASIC2.28□□□□□ -2.04
CTCFP49711 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.28□□□□□ -2.04
CTCFP49711 Y_RNA.632-201ENST00000459189 102 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNU7-14P-201ENST00000459331 62 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RPS23P5-201ENST00000495419 428 ntBASIC2.28□□□□□ -2.04
CTCFP49711 MTND3P22-201ENST00000510932 243 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNU6-307P-201ENST00000516743 106 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNU2-44P-201ENST00000516795 194 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNA5SP102-201ENST00000516865 106 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RNA5SP54-201ENST00000516951 92 ntBASIC2.28□□□□□ -2.04
CTCFP49711 RAB11AP2-201ENST00000545905 639 ntBASIC2.28□□□□□ -2.04
CTCFP49711 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.28□□□□□ -2.04
CTCFP49711 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.28□□□□□ -2.04
CTCFP49711 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
CTCFP49711 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.27□□□□□ -2.05
CTCFP49711 RNU6-874P-201ENST00000362390 105 ntBASIC2.27□□□□□ -2.05
CTCFP49711 RNU6-137P-201ENST00000363680 108 ntBASIC2.27□□□□□ -2.05
CTCFP49711 Y_RNA.205-201ENST00000364128 113 ntBASIC2.27□□□□□ -2.05
CTCFP49711 RNU6-867P-201ENST00000364956 107 ntBASIC2.27□□□□□ -2.05
CTCFP49711 RNU6-890P-201ENST00000384121 107 ntBASIC2.27□□□□□ -2.05
CTCFP49711 SNORD14D-201ENST00000384390 87 ntBASIC2.27□□□□□ -2.05
CTCFP49711 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.27□□□□□ -2.05
CTCFP49711 ELOCP24-201ENST00000456370 334 ntBASIC2.27□□□□□ -2.05
CTCFP49711 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
CTCFP49711 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.27□□□□□ -2.05
CTCFP49711 RNU6-120P-201ENST00000516077 103 ntBASIC2.27□□□□□ -2.05
CTCFP49711 Y_RNA.718-201ENST00000517110 102 ntBASIC2.27□□□□□ -2.05
CTCFP49711 AL117336.2-201ENST00000602435 335 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms