Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR1246-201ENST00000636535 73 ntBASIC-0.63□□□□□ -2.51
HTTP42858 RNU6-187P-201ENST00000384139 106 ntBASIC-0.64□□□□□ -2.51
HTTP42858 RNU6-754P-201ENST00000391166 107 ntBASIC-0.64□□□□□ -2.51
HTTP42858 HLA-S-202ENST00000425174 53 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MTND1P14-201ENST00000427400 950 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MTND1P4-201ENST00000435196 415 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MTCYBP39-201ENST00000437562 491 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MTND1P33-201ENST00000446251 917 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC093850.1-201ENST00000454121 251 ntBASIC-0.64□□□□□ -2.51
HTTP42858 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.64□□□□□ -2.51
HTTP42858 RNU6-948P-201ENST00000516374 107 ntBASIC-0.64□□□□□ -2.51
HTTP42858 SNORA27.4-201ENST00000516650 95 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC013828.2-201ENST00000532487 235 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.64□□□□□ -2.51
HTTP42858 AL358072.1-201ENST00000604156 575 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC007684.1-201ENST00000609671 477 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AL096861.1-201ENST00000610899 123 ntBASIC-0.64□□□□□ -2.51
HTTP42858 RNU6-726P-201ENST00000364680 107 ntBASIC-0.64□□□□□ -2.51
HTTP42858 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.64□□□□□ -2.51
HTTP42858 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
HTTP42858 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MIR526A1-201ENST00000384897 85 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MT-TY-201ENST00000387409 66 ntBASIC-0.64□□□□□ -2.51
HTTP42858 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
HTTP42858 AL590135.1-201ENST00000422215 156 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC019205.3-201ENST00000424573 156 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC016700.2-201ENST00000446011 156 ntBASIC-0.64□□□□□ -2.51
HTTP42858 SNORD54-201ENST00000459159 67 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC015911.1-201ENST00000495111 156 ntBASIC-0.64□□□□□ -2.51
HTTP42858 RNA5SP216-201ENST00000516111 123 ntBASIC-0.64□□□□□ -2.51
HTTP42858 RNU6-977P-201ENST00000516411 103 ntBASIC-0.64□□□□□ -2.51
HTTP42858 SNORD111.1-201ENST00000516421 86 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.64□□□□□ -2.51
HTTP42858 MIR4778-201ENST00000577635 80 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC018889.1-201ENST00000605372 397 ntBASIC-0.64□□□□□ -2.51
HTTP42858 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.64□□□□□ -2.51
HTTP42858 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.64□□□□□ -2.51
HTTP42858 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
HTTP42858 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.64□□□□□ -2.51
HTTP42858 MIR520C-201ENST00000385005 87 ntBASIC-0.64□□□□□ -2.51
HTTP42858 RNY4P36-201ENST00000391116 96 ntBASIC-0.64□□□□□ -2.51
HTTP42858 SNORA3B-201ENST00000391305 131 ntBASIC-0.64□□□□□ -2.51
HTTP42858 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
HTTP42858 BTF3P15-201ENST00000455606 336 ntBASIC-0.64□□□□□ -2.51
HTTP42858 SNORA74.3-201ENST00000517108 154 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC010525.2-201ENST00000590920 195 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AC063944.3-201ENST00000609969 533 ntBASIC-0.64□□□□□ -2.51
HTTP42858 AL159153.1-201ENST00000619688 317 ntBASIC-0.64□□□□□ -2.51
HTTP42858 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.65□□□□□ -2.51
HTTP42858 SNORA26.3-201ENST00000391119 136 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AL355994.1-201ENST00000424379 260 ntBASIC-0.65□□□□□ -2.51
HTTP42858 BX276092.1-201ENST00000427368 251 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AC078795.2-201ENST00000602835 1252 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.65□□□□□ -2.51
HTTP42858 AL662814.1-201ENST00000617364 121 ntBASIC-0.65□□□□□ -2.51
HTTP42858 snoZ40.1-201ENST00000364540 72 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-396P-201ENST00000365369 105 ntBASIC-0.65□□□□□ -2.51
HTTP42858 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.65□□□□□ -2.51
HTTP42858 MTCO2P33-201ENST00000402100 465 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-447P-201ENST00000410293 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-355P-201ENST00000410427 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-791P-201ENST00000410467 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-705P-201ENST00000410601 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-860P-201ENST00000410860 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-785P-201ENST00000411324 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.65□□□□□ -2.51
HTTP42858 AL512326.2-201ENST00000426359 151 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.65□□□□□ -2.51
HTTP42858 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-416P-201ENST00000516265 103 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AC009902.1-201ENST00000519351 183 ntBASIC-0.65□□□□□ -2.51
HTTP42858 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.65□□□□□ -2.51
HTTP42858 AL355598.1-201ENST00000604169 202 ntBASIC-0.65□□□□□ -2.51
HTTP42858 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.65□□□□□ -2.51
HTTP42858 AC122133.1-201ENST00000613964 233 ntBASIC-0.65□□□□□ -2.51
HTTP42858 U6.90-201ENST00000614007 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 U6.70-201ENST00000620287 104 ntBASIC-0.65□□□□□ -2.51
HTTP42858 AC104820.1-201ENST00000624183 307 ntBASIC-0.65□□□□□ -2.51
HTTP42858 RNU6-212P-201ENST00000362642 104 ntBASIC-0.66□□□□□ -2.51
HTTP42858 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.66□□□□□ -2.51
HTTP42858 AC020550.1-201ENST00000447385 163 ntBASIC-0.66□□□□□ -2.51
HTTP42858 TPT1P7-201ENST00000458300 517 ntBASIC-0.66□□□□□ -2.51
HTTP42858 RPS29P27-201ENST00000463711 170 ntBASIC-0.66□□□□□ -2.51
HTTP42858 AC079382.1-201ENST00000493346 557 ntBASIC-0.66□□□□□ -2.51
HTTP42858 AC025459.1-201ENST00000504072 156 ntBASIC-0.66□□□□□ -2.51
HTTP42858 MTND3P5-201ENST00000512798 333 ntBASIC-0.66□□□□□ -2.51
HTTP42858 AC012433.1-201ENST00000588916 398 ntBASIC-0.66□□□□□ -2.51
HTTP42858 AC022217.4-201ENST00000604389 163 ntBASIC-0.66□□□□□ -2.51
HTTP42858 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.66□□□□□ -2.52
HTTP42858 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.66□□□□□ -2.52
HTTP42858 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.66□□□□□ -2.52
HTTP42858 MTND1P21-201ENST00000412991 285 ntBASIC-0.66□□□□□ -2.52
HTTP42858 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.66□□□□□ -2.52
HTTP42858 TIMM9P3-201ENST00000428659 274 ntBASIC-0.66□□□□□ -2.52
HTTP42858 RNU6-123P-201ENST00000516163 102 ntBASIC-0.66□□□□□ -2.52
HTTP42858 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms