Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC113139.1-201ENST00000605049 239 ntBASIC2.01□□□□□ -2.09
HADHAP40939 AL355802.3-201ENST00000607571 545 ntBASIC2.01□□□□□ -2.09
HADHAP40939 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.01□□□□□ -2.09
HADHAP40939 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HADHAP40939 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HADHAP40939 Y_RNA.179-201ENST00000363844 90 ntBASIC2□□□□□ -2.09
HADHAP40939 Y_RNA.364-201ENST00000365532 101 ntBASIC2□□□□□ -2.09
HADHAP40939 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2□□□□□ -2.09
HADHAP40939 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
HADHAP40939 AC008134.1-201ENST00000420943 193 ntBASIC2□□□□□ -2.09
HADHAP40939 MTCO3P29-201ENST00000432119 779 ntBASIC2□□□□□ -2.09
HADHAP40939 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2□□□□□ -2.09
HADHAP40939 RNU7-57P-201ENST00000459540 60 ntBASIC2□□□□□ -2.09
HADHAP40939 RPL7P42-201ENST00000481005 679 ntBASIC2□□□□□ -2.09
HADHAP40939 RPL17P19-201ENST00000489069 552 ntBASIC2□□□□□ -2.09
HADHAP40939 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2□□□□□ -2.09
HADHAP40939 SUB1P4-201ENST00000566062 339 ntBASIC2□□□□□ -2.09
HADHAP40939 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2□□□□□ -2.09
HADHAP40939 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2□□□□□ -2.09
HADHAP40939 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
HADHAP40939 AC010999.1-201ENST00000611856 324 ntBASIC2□□□□□ -2.09
HADHAP40939 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2□□□□□ -2.09
HADHAP40939 snoZ196.1-201ENST00000625269 89 ntBASIC2□□□□□ -2.09
HADHAP40939 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2□□□□□ -2.09
HADHAP40939 Y_RNA.48-201ENST00000362710 103 ntBASIC1.99□□□□□ -2.09
HADHAP40939 Y_RNA.142-201ENST00000363491 102 ntBASIC1.99□□□□□ -2.09
HADHAP40939 Y_RNA.390-201ENST00000383932 102 ntBASIC1.99□□□□□ -2.09
HADHAP40939 MIR515-2-201ENST00000384883 83 ntBASIC1.99□□□□□ -2.09
HADHAP40939 MIR515-1-201ENST00000384884 83 ntBASIC1.99□□□□□ -2.09
HADHAP40939 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AC011406.1-201ENST00000512440 370 ntBASIC1.99□□□□□ -2.09
HADHAP40939 RNVU1-2-201ENST00000516326 135 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.99□□□□□ -2.09
HADHAP40939 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.99□□□□□ -2.09
HADHAP40939 AC069114.2-201ENST00000604699 304 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AC016727.1-205ENST00000605437 569 ntBASIC1.99□□□□□ -2.09
HADHAP40939 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AC133104.2-201ENST00000615272 193 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AC092794.2-201ENST00000620933 563 ntBASIC1.99□□□□□ -2.09
HADHAP40939 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AC022513.1-201ENST00000624512 117 ntBASIC1.99□□□□□ -2.09
HADHAP40939 AL669831.3-213ENST00000636676 183 ntBASIC1.99□□□□□ -2.09
HADHAP40939 SNORA72.1-201ENST00000363485 129 ntBASIC1.98□□□□□ -2.09
HADHAP40939 Y_RNA.404-201ENST00000383978 102 ntBASIC1.98□□□□□ -2.09
HADHAP40939 MIR1289-2-201ENST00000408360 111 ntBASIC1.98□□□□□ -2.09
HADHAP40939 RNA5SP100-201ENST00000410903 110 ntBASIC1.98□□□□□ -2.09
HADHAP40939 RNA5SP59-201ENST00000410922 110 ntBASIC1.98□□□□□ -2.09
HADHAP40939 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
HADHAP40939 CST2P1-201ENST00000425770 87 ntBASIC1.98□□□□□ -2.09
HADHAP40939 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.98□□□□□ -2.09
HADHAP40939 AC069257.2-201ENST00000441819 155 ntBASIC1.98□□□□□ -2.09
HADHAP40939 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.98□□□□□ -2.09
HADHAP40939 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
HADHAP40939 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.98□□□□□ -2.09
HADHAP40939 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
HADHAP40939 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.98□□□□□ -2.09
HADHAP40939 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.98□□□□□ -2.09
HADHAP40939 RNU1-117P-201ENST00000517041 158 ntBASIC1.98□□□□□ -2.09
HADHAP40939 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.98□□□□□ -2.09
HADHAP40939 AC005730.3-201ENST00000583067 366 ntBASIC1.98□□□□□ -2.09
HADHAP40939 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.98□□□□□ -2.09
HADHAP40939 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.98□□□□□ -2.09
HADHAP40939 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.98□□□□□ -2.09
HADHAP40939 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
HADHAP40939 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HADHAP40939 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HADHAP40939 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
HADHAP40939 Y_RNA.106-201ENST00000363189 100 ntBASIC1.97□□□□□ -2.09
HADHAP40939 SNORA72.2-201ENST00000365028 127 ntBASIC1.97□□□□□ -2.09
HADHAP40939 RNU6-281P-201ENST00000384212 103 ntBASIC1.97□□□□□ -2.09
HADHAP40939 Y_RNA.473-201ENST00000384333 102 ntBASIC1.97□□□□□ -2.09
HADHAP40939 Y_RNA.474-201ENST00000384341 102 ntBASIC1.97□□□□□ -2.09
HADHAP40939 RNA5SP504-201ENST00000410676 117 ntBASIC1.97□□□□□ -2.09
HADHAP40939 RNU6-370P-201ENST00000411008 104 ntBASIC1.97□□□□□ -2.09
HADHAP40939 RPL23AP50-201ENST00000434149 455 ntBASIC1.97□□□□□ -2.09
HADHAP40939 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.97□□□□□ -2.09
HADHAP40939 RNU6-221P-201ENST00000459541 99 ntBASIC1.97□□□□□ -2.09
HADHAP40939 AC091179.3-201ENST00000474761 144 ntBASIC1.97□□□□□ -2.09
HADHAP40939 Y_RNA.683-201ENST00000516508 93 ntBASIC1.97□□□□□ -2.09
HADHAP40939 RNA5SP384-201ENST00000516615 116 ntBASIC1.97□□□□□ -2.09
HADHAP40939 MIR2355-201ENST00000517199 87 ntBASIC1.97□□□□□ -2.09
HADHAP40939 UBL5P4-201ENST00000562584 236 ntBASIC1.97□□□□□ -2.09
HADHAP40939 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.97□□□□□ -2.09
HADHAP40939 MIR5695-201ENST00000579717 85 ntBASIC1.97□□□□□ -2.09
HADHAP40939 AP001094.1-201ENST00000579805 193 ntBASIC1.97□□□□□ -2.09
HADHAP40939 MIR5089-201ENST00000580047 84 ntBASIC1.97□□□□□ -2.09
HADHAP40939 SNRPGP19-201ENST00000603826 189 ntBASIC1.97□□□□□ -2.09
HADHAP40939 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HADHAP40939 RNU6-1188P-201ENST00000363795 107 ntBASIC1.96□□□□□ -2.1
HADHAP40939 RNU6-1019P-201ENST00000364424 107 ntBASIC1.96□□□□□ -2.1
HADHAP40939 RNA5SP213-201ENST00000391031 106 ntBASIC1.96□□□□□ -2.1
HADHAP40939 SNORA75.6-201ENST00000391318 127 ntBASIC1.96□□□□□ -2.1
HADHAP40939 MTCYBP4-201ENST00000401524 249 ntBASIC1.96□□□□□ -2.1
HADHAP40939 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
HADHAP40939 EBAG9P1-201ENST00000418955 543 ntBASIC1.96□□□□□ -2.1
HADHAP40939 AC060773.1-201ENST00000421698 310 ntBASIC1.96□□□□□ -2.1
HADHAP40939 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.96□□□□□ -2.1
HADHAP40939 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.96□□□□□ -2.1
HADHAP40939 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
HADHAP40939 SCARNA16.2-201ENST00000516520 172 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms