Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR8076-201ENST00000611401 83 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AC008163.1-202ENST00000636004 2889 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 SNORA32.2-201ENST00000384049 122 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 Y_RNA.433-201ENST00000384089 102 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 MIR208B-201ENST00000401172 77 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AC099513.1-201ENST00000490423 301 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 Y_RNA.654-201ENST00000497848 106 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.95□□□□□ -2.26
BRCA1P38398 RNU6-1041P-201ENST00000516254 102 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 RNU6-856P-201ENST00000516959 98 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 RNU6-323P-201ENST00000521915 107 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.95□□□□□ -2.26
BRCA1P38398 AL512310.8-201ENST00000550183 120 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AC064836.2-201ENST00000609491 462 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 AL109933.3-201ENST00000619095 188 ntBASIC0.95□□□□□ -2.26
BRCA1P38398 ELL2P3-201ENST00000457883 1602 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 RNU6-968P-201ENST00000384076 107 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 MTND3P9-201ENST00000429526 346 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 AC074290.1-201ENST00000448883 135 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 HMGN2P9-201ENST00000476875 229 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 AL163973.1-201ENST00000484753 577 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 AC007834.2-201ENST00000536310 343 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.94□□□□□ -2.26
BRCA1P38398 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.94□□□□□ -2.26
BRCA1P38398 AC133485.1-201ENST00000567176 124 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 AC138907.6-201ENST00000568401 126 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 AC087752.4-201ENST00000605911 462 ntBASIC0.94□□□□□ -2.26
BRCA1P38398 MIR26B-201ENST00000362251 77 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 Y_RNA.85-201ENST00000363014 111 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RNU6-137P-201ENST00000363680 108 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RNU5A-6P-201ENST00000384136 116 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 MIR515-2-201ENST00000384883 83 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 MIR515-1-201ENST00000384884 83 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RN7SKP200-201ENST00000410564 320 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RNU6-248P-201ENST00000410720 107 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.93□□□□□ -2.26
BRCA1P38398 USP9YP29-201ENST00000445112 563 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RNU6-261P-201ENST00000459506 102 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RPL39P5-202ENST00000512505 151 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AC025465.4-201ENST00000513422 638 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RNU6-344P-201ENST00000516635 111 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.93□□□□□ -2.26
BRCA1P38398 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AP000907.4-201ENST00000604143 237 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AL133215.3-201ENST00000609801 448 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AC027335.2-201ENST00000624030 375 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 AC068137.4-201ENST00000638485 296 ntBASIC0.93□□□□□ -2.26
BRCA1P38398 RNA5SP499-201ENST00000363982 119 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 RNU6-939P-201ENST00000384634 107 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 MIR586-201ENST00000385035 97 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 RPL37P10-201ENST00000412884 288 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.92□□□□□ -2.26
BRCA1P38398 AC073464.1-201ENST00000429823 534 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 USP9YP28-201ENST00000435142 589 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.92□□□□□ -2.26
BRCA1P38398 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.92□□□□□ -2.26
BRCA1P38398 AC104576.1-201ENST00000524225 88 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 SCOCP1-201ENST00000554676 349 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 SUB1P2-201ENST00000556401 297 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 MIR4709-201ENST00000577272 72 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 SNORD115-8-201ENST00000363856 82 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 SNORD115-38-201ENST00000365037 82 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 Y_RNA.458-201ENST00000384240 102 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.92□□□□□ -2.26
BRCA1P38398 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.92□□□□□ -2.26
BRCA1P38398 MTCO2P19-201ENST00000427513 598 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 AC009237.7-201ENST00000447357 229 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 RN7SKP88-201ENST00000516847 250 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 AC004584.2-201ENST00000570407 410 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 HSPE1P19-201ENST00000603327 295 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 7SK.8-201ENST00000612110 250 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 7SK.11-201ENST00000615477 250 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 AC126177.8-201ENST00000618339 1015 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 7SK.13-201ENST00000622040 250 ntBASIC0.92□□□□□ -2.26
BRCA1P38398 RNU4-21P-201ENST00000362802 126 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 RNU6-877P-201ENST00000383868 107 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 SNORA67.2-201ENST00000384300 149 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 AL117342.1-201ENST00000404861 406 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.91□□□□□ -2.26
BRCA1P38398 AL353572.1-201ENST00000442490 417 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.91□□□□□ -2.26
BRCA1P38398 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.91□□□□□ -2.26
BRCA1P38398 7SK.7-201ENST00000603504 247 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 uc_338.34-201ENST00000617467 174 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 AC103705.1-201ENST00000619013 241 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 MIR6863-201ENST00000636112 90 ntBASIC0.91□□□□□ -2.26
BRCA1P38398 RNU5B-2P-201ENST00000363036 113 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 RNU2-66P-201ENST00000410650 161 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 RPS26P42-201ENST00000413485 326 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.9□□□□□ -2.26
BRCA1P38398 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.9□□□□□ -2.26
BRCA1P38398 NFU1P2-201ENST00000448700 469 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 HMGN1P12-201ENST00000499125 195 ntBASIC0.9□□□□□ -2.26
BRCA1P38398 SNORA31.4-201ENST00000516049 129 ntBASIC0.9□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms