Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC009541.1-201ENST00000438279 2662 ntBASIC1.8□□□□□ -2.12
CHRNA3P32297 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CHRNA3P32297 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
CHRNA3P32297 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.123-201ENST00000363338 102 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.187-201ENST00000363918 113 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.259-201ENST00000364619 101 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.332-201ENST00000365271 113 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.79□□□□□ -2.12
CHRNA3P32297 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CHRNA3P32297 SNORA12-201ENST00000391162 147 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.646-201ENST00000410980 101 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 AL358453.1-201ENST00000422522 250 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.639-201ENST00000458981 102 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.79□□□□□ -2.12
CHRNA3P32297 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 RNU6-567P-201ENST00000516746 107 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 AC087441.2-201ENST00000529141 262 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.79□□□□□ -2.12
CHRNA3P32297 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.79□□□□□ -2.12
CHRNA3P32297 SUB1P3-201ENST00000564581 315 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 MIR3923-201ENST00000579521 83 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 PISRT1.1-201ENST00000616930 107 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 AL160413.1-201ENST00000622780 310 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 MTND5P10-201ENST00000603719 1809 ntBASIC1.79□□□□□ -2.12
CHRNA3P32297 Y_RNA.4-201ENST00000362333 112 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 Y_RNA.58-201ENST00000362807 102 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 Y_RNA.154-201ENST00000363624 102 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNA5SP493-201ENST00000364115 91 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNU4-9P-201ENST00000364951 139 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNY3P1-201ENST00000365085 102 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNY3-201ENST00000365484 102 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 SNORD42.2-201ENST00000365570 69 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 Y_RNA.395-201ENST00000383945 109 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNU6-1040P-201ENST00000383974 107 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 SNORA29-201ENST00000384183 140 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CHRNA3P32297 AL627390.1-201ENST00000396055 340 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNA5SP201-201ENST00000410316 124 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RPL31P63-201ENST00000422565 375 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CHRNA3P32297 HMGN2P18-201ENST00000450680 270 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CHRNA3P32297 MTCO3P10-201ENST00000455912 772 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNU1-131P-201ENST00000458943 161 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RN7SKP210-201ENST00000459176 261 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RPL7P42-201ENST00000481005 679 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 HMGN1P13-201ENST00000505795 138 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 RNA5SP384-201ENST00000516615 116 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 SNORA31.16-201ENST00000516773 139 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.78□□□□□ -2.12
CHRNA3P32297 MIR3169-201ENST00000578032 83 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 AC005014.2-201ENST00000607795 599 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 AC137590.2-201ENST00000619709 240 ntBASIC1.78□□□□□ -2.12
CHRNA3P32297 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CHRNA3P32297 RNU6-1115P-201ENST00000362490 106 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 RNU6-137P-201ENST00000363680 108 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 SNORD115-8-201ENST00000363856 82 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 Y_RNA.813-201ENST00000364639 102 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 SNORD115-38-201ENST00000365037 82 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 RNU6-968P-201ENST00000384076 107 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 RNA5SP213-201ENST00000391031 106 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.77□□□□□ -2.13
CHRNA3P32297 MIR449C-201ENST00000516047 92 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 CBX3P8-201ENST00000532412 525 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.77□□□□□ -2.13
CHRNA3P32297 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.77□□□□□ -2.13
CHRNA3P32297 CYP4A27P-201ENST00000567218 190 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.77□□□□□ -2.13
CHRNA3P32297 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 MIR4273-201ENST00000582824 84 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 MIR4719-201ENST00000585233 84 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 AC005786.1-201ENST00000588553 154 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 AC010900.2-201ENST00000604508 210 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 AC090574.1-201ENST00000623186 233 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 AC091925.1-201ENST00000623204 462 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 MTND4LP32-201ENST00000636111 270 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 WWP1P1-201ENST00000466609 2769 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 LINC02555-201ENST00000563933 1951 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 AC006026.1-201ENST00000444025 1803 ntBASIC1.77□□□□□ -2.13
CHRNA3P32297 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CHRNA3P32297 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
CHRNA3P32297 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.76□□□□□ -2.13
CHRNA3P32297 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CHRNA3P32297 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 Y_RNA.146-201ENST00000363549 102 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 Y_RNA.164-201ENST00000363709 102 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 U3.9-201ENST00000363823 204 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 RNU6-890P-201ENST00000384121 107 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 Y_RNA.473-201ENST00000384333 102 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 Y_RNA.533-201ENST00000384596 114 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 MIR559-201ENST00000385188 96 ntBASIC1.76□□□□□ -2.13
CHRNA3P32297 RPL23AP36-201ENST00000413895 458 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms