Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-727P-201ENST00000363592 107 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 Y_RNA.597-201ENST00000410463 100 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 RNA5SP475-201ENST00000410568 110 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 ELOCP21-201ENST00000412558 336 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 AC063976.3-201ENST00000426849 329 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 NDUFB4P10-201ENST00000452541 359 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 AC005042.3-201ENST00000453230 174 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 SERF1AP1-201ENST00000514575 187 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 RNU6-388P-201ENST00000517012 105 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 RNU6-389P-201ENST00000517048 105 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 DEFB131C-201ENST00000528817 165 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC6A4P31645 AC018630.3-201ENST00000542637 96 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC6A4P31645 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.79□□□□□ -1.96
SLC6A4P31645 AC022441.3-201ENST00000605737 136 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 AC141273.2-201ENST00000618989 130 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 MIR3674-201ENST00000636576 68 ntBASIC2.79□□□□□ -1.96
SLC6A4P31645 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC6A4P31645 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SLC6A4P31645 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SLC6A4P31645 RNU6-102P-201ENST00000384485 104 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 CYP2C59P-201ENST00000457790 269 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 RNU2-31P-201ENST00000516954 155 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 SNORA31.26-201ENST00000517250 137 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC6A4P31645 AC007536.1-201ENST00000533382 349 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 MIR3199-1-201ENST00000582434 88 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 MIR3616-201ENST00000584070 92 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 AL713866.2-201ENST00000603579 219 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A4P31645 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 AL590240.4-201ENST00000616908 390 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 MIR5739-201ENST00000619803 80 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 AC006001.4-201ENST00000622243 395 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 AC008873.1-201ENST00000625051 138 ntBASIC2.78□□□□□ -1.96
SLC6A4P31645 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A4P31645 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A4P31645 AC138915.1-201ENST00000565427 1685 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC6A4P31645 RNU6-859P-201ENST00000362728 107 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 Y_RNA.60-201ENST00000362831 98 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 RNU1-72P-201ENST00000362976 153 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 Y_RNA.331-201ENST00000365267 102 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 Y_RNA.415-201ENST00000384012 112 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 Y_RNA.515-201ENST00000384535 112 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 Y_RNA.569-201ENST00000384749 103 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 SNORA12-201ENST00000391162 147 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 MIR887-201ENST00000401258 79 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 RNU6-1328P-201ENST00000410938 106 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 TOMM22P2-201ENST00000430735 237 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 EEF1B2P7-201ENST00000451177 676 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 AC107222.1-201ENST00000510899 637 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 RNU5F-4P-201ENST00000516581 114 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 BX284668.6-201ENST00000606899 438 ntBASIC2.77□□□□□ -1.97
SLC6A4P31645 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC6A4P31645 U3.8-201ENST00000363675 217 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 RNA5SP240-201ENST00000365355 128 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 RNU6-1274P-201ENST00000384557 107 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 MIR218-1-201ENST00000384999 110 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC6A4P31645 RNU4-30P-201ENST00000410245 143 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 RNA5SP508-201ENST00000411327 119 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 AC004866.1-201ENST00000411748 78 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 POLR2KP2-201ENST00000438155 177 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC6A4P31645 MTND1P19-201ENST00000511780 315 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.76□□□□□ -1.97
SLC6A4P31645 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 Y_RNA.680-201ENST00000516441 93 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.76□□□□□ -1.97
SLC6A4P31645 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.76□□□□□ -1.97
SLC6A4P31645 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.76□□□□□ -1.97
SLC6A4P31645 AC006380.1-201ENST00000603598 186 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 U2.14-201ENST00000615943 113 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.76□□□□□ -1.97
SLC6A4P31645 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A4P31645 AC080128.1-201ENST00000474389 1917 ntBASIC2.76□□□□□ -1.97
SLC6A4P31645 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SLC6A4P31645 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SLC6A4P31645 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SLC6A4P31645 Y_RNA.16-201ENST00000362421 102 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 Y_RNA.136-201ENST00000363444 102 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 RNU6-514P-201ENST00000384208 107 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 Y_RNA.477-201ENST00000384352 108 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 MIR586-201ENST00000385035 97 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 MIR300-201ENST00000401138 83 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 MIR1261-201ENST00000408659 82 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.75□□□□□ -1.97
SLC6A4P31645 AL121890.1-201ENST00000435457 205 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
SLC6A4P31645 Z96811.1-201ENST00000445880 108 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 AC074290.1-201ENST00000448883 135 ntBASIC2.75□□□□□ -1.97
SLC6A4P31645 SRIP1-201ENST00000489235 288 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms