Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MIR338-201ENST00000636369 67 ntBASIC1.46□□□□□ -2.18
PTPN6P29350 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.46□□□□□ -2.18
PTPN6P29350 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.46□□□□□ -2.18
PTPN6P29350 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 SNORD115-32-201ENST00000364079 82 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6-534P-201ENST00000364877 106 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6-245P-201ENST00000384020 107 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6-1013P-201ENST00000384180 107 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 Y_RNA.453-201ENST00000384223 109 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 Y_RNA.516-201ENST00000384541 124 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6-306P-201ENST00000384617 107 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6-541P-201ENST00000384709 110 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 MIR153-2-201ENST00000385225 87 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNA5SP118-201ENST00000410385 109 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 AC007098.1-201ENST00000420122 367 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.45□□□□□ -2.18
PTPN6P29350 SNORD11B-201ENST00000607707 90 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.45□□□□□ -2.18
PTPN6P29350 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
PTPN6P29350 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
PTPN6P29350 snoU2-30.2-201ENST00000362805 70 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 Y_RNA.157-201ENST00000363638 102 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 Y_RNA.164-201ENST00000363709 102 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 SNORD115-8-201ENST00000363856 82 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 Y_RNA.238-201ENST00000364441 102 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 SNORD115-38-201ENST00000365037 82 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 Y_RNA.319-201ENST00000365138 92 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 SNORD116-4-201ENST00000384733 96 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.44□□□□□ -2.18
PTPN6P29350 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.44□□□□□ -2.18
PTPN6P29350 BTF3P4-201ENST00000418852 495 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.44□□□□□ -2.18
PTPN6P29350 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.44□□□□□ -2.18
PTPN6P29350 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.44□□□□□ -2.18
PTPN6P29350 HMGN2P34-201ENST00000437647 269 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 MTATP6P13-201ENST00000438531 667 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 MTND4LP16-201ENST00000440828 295 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 HSPE1P24-201ENST00000450782 238 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 RPL26P26-201ENST00000480251 434 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 RNU6-58P-201ENST00000517143 103 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.44□□□□□ -2.18
PTPN6P29350 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.44□□□□□ -2.18
PTPN6P29350 AC093913.1-201ENST00000614178 329 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 AC008873.1-201ENST00000625051 138 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 MIR3662-201ENST00000637030 95 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
PTPN6P29350 AC100821.1-201ENST00000523153 2479 ntBASIC1.44□□□□□ -2.18
PTPN6P29350 SNORA63D-201ENST00000364359 132 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 SNORA72.2-201ENST00000365028 127 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 SNORA67.2-201ENST00000384300 149 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 RNU6-1215P-201ENST00000384441 102 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 RNU4-62P-201ENST00000410125 130 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.43□□□□□ -2.18
PTPN6P29350 FO393415.2-201ENST00000480085 343 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 RNU6-864P-201ENST00000516256 108 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 SNORA25.14-201ENST00000516481 132 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.43□□□□□ -2.18
PTPN6P29350 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.43□□□□□ -2.18
PTPN6P29350 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.43□□□□□ -2.18
PTPN6P29350 MIR4273-201ENST00000582824 84 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 snoZ196.1-201ENST00000625269 89 ntBASIC1.43□□□□□ -2.18
PTPN6P29350 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PTPN6P29350 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
PTPN6P29350 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.42□□□□□ -2.18
PTPN6P29350 RNU6-417P-201ENST00000384712 107 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 MIR515-2-201ENST00000384883 83 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 MIR515-1-201ENST00000384884 83 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 MIR548B-201ENST00000385247 97 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 SNORD115-47-201ENST00000391226 86 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 RN7SKP51-201ENST00000410781 304 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.42□□□□□ -2.18
PTPN6P29350 AL163540.1-201ENST00000485382 386 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.42□□□□□ -2.18
PTPN6P29350 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 SNORA77B-201ENST00000578179 125 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 AP001485.1-201ENST00000604799 199 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 MIR8063-201ENST00000621930 81 ntBASIC1.42□□□□□ -2.18
PTPN6P29350 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.42□□□□□ -2.18
PTPN6P29350 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 ICE2P2-201ENST00000483823 2787 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 RNU6-831P-201ENST00000384548 107 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 RNA5SP323-201ENST00000391094 133 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PTPN6P29350 AP1B1P2-201ENST00000416196 106 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 RPL30P16-201ENST00000419341 429 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 AC008134.1-201ENST00000420943 193 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 AL445305.1-201ENST00000432577 575 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 AC073910.1-201ENST00000445047 438 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms