Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DMAP28067 AC121333.1-201ENST00000567488 2709 ntBASIC0.91□□□□□ -2.26
HLA-DMAP28067 snoU2-30.2-201ENST00000362805 70 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AL590002.1-201ENST00000406554 418 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 RNU6-908P-201ENST00000410160 94 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DMAP28067 Z82205.1-201ENST00000428456 297 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 ERLEC1P1-201ENST00000433806 578 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DMAP28067 AC005002.2-201ENST00000438228 269 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.9□□□□□ -2.27
HLA-DMAP28067 snoU13.27-201ENST00000459278 104 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DMAP28067 MTCO1P29-201ENST00000496868 288 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.9□□□□□ -2.27
HLA-DMAP28067 Y_RNA.665-201ENST00000516177 98 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 MTND2P38-201ENST00000522536 667 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AC016957.1-201ENST00000534895 309 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AL512310.8-201ENST00000550183 120 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AC004492.1-201ENST00000607036 742 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AL365434.2-201ENST00000607979 234 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 AL353997.5-201ENST00000618886 171 ntBASIC0.9□□□□□ -2.27
HLA-DMAP28067 RNU4-75P-201ENST00000364621 146 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 SNORD87-201ENST00000364849 89 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 Y_RNA.481-201ENST00000384373 102 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 RNU6-95P-201ENST00000384697 107 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 MIR32-201ENST00000384965 70 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 RPL21P1-201ENST00000399532 476 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DMAP28067 SNRPEP10-201ENST00000420249 274 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.89□□□□□ -2.27
HLA-DMAP28067 MTND1P29-201ENST00000448112 647 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 RPS27P1-201ENST00000450552 247 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 snoU13.23-201ENST00000458863 104 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 RN7SKP210-201ENST00000459176 261 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC107401.1-201ENST00000503426 685 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC103851.1-201ENST00000506833 274 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 SNORA31.10-201ENST00000516482 106 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC025647.1-201ENST00000517879 253 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 MTND1P5-201ENST00000517906 940 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 ZNF519P2-201ENST00000557032 169 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC026470.2-201ENST00000561492 181 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 FRG2DP-202ENST00000566967 323 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC245008.1-201ENST00000608123 476 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AF250324.2-201ENST00000608299 610 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC103591.3-201ENST00000608684 209 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC137590.2-201ENST00000619709 240 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC009033.1-201ENST00000624279 431 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.89□□□□□ -2.27
HLA-DMAP28067 AC068137.3-201ENST00000639191 341 ntBASIC0.89□□□□□ -2.27
HLA-DMAP28067 MIR586-201ENST00000385035 97 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 RNA5SP213-201ENST00000391031 106 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 RNU6-332P-201ENST00000391193 108 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 AC069257.2-201ENST00000441819 155 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 HMGN1P12-201ENST00000499125 195 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 RNU6-1281P-201ENST00000516223 105 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 RNU2-34P-201ENST00000516534 121 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 SUMO2P16-201ENST00000519475 264 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AC136932.1-201ENST00000574771 208 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 MIR3672-201ENST00000584290 82 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AL929325.1-201ENST00000603096 117 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 SNRPGP20-201ENST00000604477 205 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.88□□□□□ -2.27
HLA-DMAP28067 AL157834.3-201ENST00000615543 103 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 AC099654.12-201ENST00000639868 649 ntBASIC0.88□□□□□ -2.27
HLA-DMAP28067 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HLA-DMAP28067 RNU6-1090P-201ENST00000364065 94 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 Y_RNA.256-201ENST00000364594 104 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 RNU6-1042P-201ENST00000384204 107 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 SNORA25-201ENST00000384384 134 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 RNU6-790P-201ENST00000384479 105 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
HLA-DMAP28067 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DMAP28067 DLGAP5P1-201ENST00000430307 464 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.87□□□□□ -2.27
HLA-DMAP28067 RNU7-66P-201ENST00000459469 62 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DMAP28067 RNU6-58P-201ENST00000517143 103 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 UBL5P4-201ENST00000562584 236 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 AC104984.5-201ENST00000586878 94 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 MZT1P2-201ENST00000604387 248 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 AC022217.4-201ENST00000604389 163 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 BX284668.6-201ENST00000606899 438 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 MIR6715A-201ENST00000615929 79 ntBASIC0.87□□□□□ -2.27
HLA-DMAP28067 MTND4P5-201ENST00000435821 1374 ntBASIC0.86□□□□□ -2.27
HLA-DMAP28067 RNU6-727P-201ENST00000363592 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms