Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.95□□□□□ -1.62
CD44P16070 Y_RNA.173-201ENST00000363776 113 ntBASIC4.95□□□□□ -1.62
CD44P16070 AL645733.1-201ENST00000402250 217 ntBASIC4.95□□□□□ -1.62
CD44P16070 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC4.95□□□□□ -1.62
CD44P16070 AL590762.4-201ENST00000425885 253 ntBASIC4.95□□□□□ -1.62
CD44P16070 RN7SL329P-201ENST00000467740 299 ntBASIC4.95□□□□□ -1.62
CD44P16070 RNU6-1108P-201ENST00000516308 104 ntBASIC4.95□□□□□ -1.62
CD44P16070 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.95□□□□□ -1.62
CD44P16070 AC006272.2-201ENST00000594725 163 ntBASIC4.95□□□□□ -1.62
CD44P16070 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.95□□□□□ -1.62
CD44P16070 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.95□□□□□ -1.62
CD44P16070 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CD44P16070 AL133243.3-201ENST00000617415 3004 ntBASIC4.95□□□□□ -1.62
CD44P16070 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD44P16070 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD44P16070 OR56B2P-202ENST00000641377 2453 ntBASIC4.95□□□□□ -1.62
CD44P16070 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 U8.5-201ENST00000364528 136 ntBASIC4.94□□□□□ -1.62
CD44P16070 RNA5SP87-201ENST00000384155 118 ntBASIC4.94□□□□□ -1.62
CD44P16070 RNU6-205P-201ENST00000390858 107 ntBASIC4.94□□□□□ -1.62
CD44P16070 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.94□□□□□ -1.62
CD44P16070 GOT2P5-201ENST00000433995 546 ntBASIC4.94□□□□□ -1.62
CD44P16070 HMGN2P34-201ENST00000437647 269 ntBASIC4.94□□□□□ -1.62
CD44P16070 AL109933.2-201ENST00000452651 260 ntBASIC4.94□□□□□ -1.62
CD44P16070 FGF7P7-201ENST00000514120 227 ntBASIC4.94□□□□□ -1.62
CD44P16070 AC022695.1-201ENST00000522089 237 ntBASIC4.94□□□□□ -1.62
CD44P16070 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CD44P16070 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD44P16070 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CD44P16070 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.93□□□□□ -1.62
CD44P16070 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.93□□□□□ -1.62
CD44P16070 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.93□□□□□ -1.62
CD44P16070 SNORA25.9-201ENST00000365087 128 ntBASIC4.93□□□□□ -1.62
CD44P16070 MIR206-201ENST00000384872 86 ntBASIC4.93□□□□□ -1.62
CD44P16070 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.93□□□□□ -1.62
CD44P16070 SNORA74C-2-201ENST00000411179 201 ntBASIC4.93□□□□□ -1.62
CD44P16070 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
CD44P16070 SPINT5P-201ENST00000448174 155 ntBASIC4.93□□□□□ -1.62
CD44P16070 RNU7-34P-201ENST00000459394 64 ntBASIC4.93□□□□□ -1.62
CD44P16070 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.93□□□□□ -1.62
CD44P16070 SNORD45.4-201ENST00000516629 73 ntBASIC4.93□□□□□ -1.62
CD44P16070 AC090821.2-201ENST00000523552 176 ntBASIC4.93□□□□□ -1.62
CD44P16070 AC103810.6-201ENST00000606708 136 ntBASIC4.93□□□□□ -1.62
CD44P16070 FAM25E-202ENST00000608562 189 ntBASIC4.93□□□□□ -1.62
CD44P16070 AL138721.1-201ENST00000616756 179 ntBASIC4.93□□□□□ -1.62
CD44P16070 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD44P16070 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD44P16070 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD44P16070 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD44P16070 ICE2P2-201ENST00000483823 2787 ntBASIC4.92□□□□□ -1.62
CD44P16070 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.92□□□□□ -1.62
CD44P16070 SNORA71.2-201ENST00000364941 134 ntBASIC4.92□□□□□ -1.62
CD44P16070 Y_RNA.494-201ENST00000384432 111 ntBASIC4.92□□□□□ -1.62
CD44P16070 MIR635-201ENST00000384830 98 ntBASIC4.92□□□□□ -1.62
CD44P16070 MIR105-2-201ENST00000385083 81 ntBASIC4.92□□□□□ -1.62
CD44P16070 RNA5SP397-201ENST00000391323 118 ntBASIC4.92□□□□□ -1.62
CD44P16070 AC244636.1-201ENST00000421152 228 ntBASIC4.92□□□□□ -1.62
CD44P16070 SNORD4B-201ENST00000459083 72 ntBASIC4.92□□□□□ -1.62
CD44P16070 RN7SKP18-201ENST00000516005 275 ntBASIC4.92□□□□□ -1.62
CD44P16070 RNU7-156P-201ENST00000517214 74 ntBASIC4.92□□□□□ -1.62
CD44P16070 MIR3152-201ENST00000579801 74 ntBASIC4.92□□□□□ -1.62
CD44P16070 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD44P16070 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD44P16070 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.92□□□□□ -1.62
CD44P16070 AC139713.2-215ENST00000641428 5037 ntBASIC4.92□□□□□ -1.62
CD44P16070 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD44P16070 AP000542.2-201ENST00000623199 6179 ntBASIC4.92□□□□□ -1.62
CD44P16070 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
CD44P16070 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CD44P16070 AC091152.2-201ENST00000591628 2569 ntBASIC4.91□□□□□ -1.62
CD44P16070 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD44P16070 RNA5SP502-201ENST00000362694 119 ntBASIC4.91□□□□□ -1.62
CD44P16070 RNU6-480P-201ENST00000384332 107 ntBASIC4.91□□□□□ -1.62
CD44P16070 AL139247.1-201ENST00000422768 325 ntBASIC4.91□□□□□ -1.62
CD44P16070 RPL12P3-201ENST00000440080 396 ntBASIC4.91□□□□□ -1.62
CD44P16070 PHBP16-201ENST00000446318 950 ntBASIC4.91□□□□□ -1.62
CD44P16070 AP002004.2-201ENST00000531656 154 ntBASIC4.91□□□□□ -1.62
CD44P16070 RN7SL690P-201ENST00000582087 240 ntBASIC4.91□□□□□ -1.62
CD44P16070 AC091953.3-201ENST00000623220 236 ntBASIC4.91□□□□□ -1.62
CD44P16070 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CD44P16070 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.91□□□□□ -1.62
CD44P16070 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.91□□□□□ -1.62
CD44P16070 AC083843.2-201ENST00000568248 6253 ntBASIC4.91□□□□□ -1.62
CD44P16070 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.91□□□□□ -1.62
CD44P16070 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD44P16070 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.9□□□□□ -1.62
CD44P16070 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD44P16070 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.9□□□□□ -1.62
CD44P16070 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CD44P16070 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD44P16070 SNORD115-34-201ENST00000362441 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-12-201ENST00000362583 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 RNU1-94P-201ENST00000362627 173 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-29-201ENST00000362834 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-9-201ENST00000362912 82 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms