Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 MIR1244-1-201ENST00000612829 85 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 TCL6_2.1-201ENST00000615162 119 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 AC084781.2-201ENST00000615568 161 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 AC098657.3-201ENST00000620434 263 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 MIR1244-3-201ENST00000635744 85 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 MIR1244-2-201ENST00000636449 85 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 MIR1244-4-202ENST00000636813 85 ntBASIC2.14□□□□□ -2.07
ACTN1P12814 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.14□□□□□ -2.07
ACTN1P12814 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ACTN1P12814 Y_RNA.106-201ENST00000363189 100 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 RNU6-727P-201ENST00000363592 107 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 RNU6-873P-201ENST00000363833 107 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 SNORD116-29-201ENST00000384516 83 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 AC139712.2-201ENST00000424302 339 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 Y_RNA.653-201ENST00000459091 95 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 AC007215.1-201ENST00000464893 276 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 AC097473.1-201ENST00000508142 408 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 AC104581.2-201ENST00000572227 430 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 MIR5695-201ENST00000579717 85 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 AC005899.2-201ENST00000584353 90 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ACTN1P12814 AL590240.4-201ENST00000616908 390 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 AC091932.3-201ENST00000624223 323 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
ACTN1P12814 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
ACTN1P12814 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ACTN1P12814 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ACTN1P12814 BX322639.1-202ENST00000423987 2213 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 RNU6-1164P-201ENST00000364428 107 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 RNU6-99P-201ENST00000364721 107 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 SNORD31B-201ENST00000364977 69 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 MIR320B2-201ENST00000408479 138 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 RNU2-20P-201ENST00000410425 191 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.12□□□□□ -2.07
ACTN1P12814 AC245102.2-201ENST00000448956 180 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.12□□□□□ -2.07
ACTN1P12814 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.12□□□□□ -2.07
ACTN1P12814 AC022493.2-201ENST00000506122 481 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 Y_RNA.675-201ENST00000516389 149 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 RNU6-307P-201ENST00000516743 106 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 MIR5701-3-201ENST00000578890 82 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 MIR4795-201ENST00000584182 89 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 MIR5701-1-201ENST00000585138 82 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 AC008749.1-201ENST00000597650 306 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 MIR5701-2-201ENST00000615634 82 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 AC130454.1-201ENST00000622948 401 ntBASIC2.12□□□□□ -2.07
ACTN1P12814 MTND5P16-201ENST00000460269 1703 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.11□□□□□ -2.07
ACTN1P12814 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
ACTN1P12814 RNU6-874P-201ENST00000362390 105 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 Y_RNA.99-201ENST00000363138 105 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 RNU4-73P-201ENST00000363164 141 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 SNORD114-6-201ENST00000364393 72 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 RNU5E-4P-201ENST00000364931 120 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 RNU6-867P-201ENST00000364956 107 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ACTN1P12814 RNY4P36-201ENST00000391116 96 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 USP9YP16-201ENST00000430287 407 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 AC009237.7-201ENST00000447357 229 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 USP9YP23-201ENST00000455085 407 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 RNA5SP54-201ENST00000516951 92 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 Y_RNA.718-201ENST00000517110 102 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 RRN3P3-201ENST00000549207 578 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 AC004584.2-201ENST00000570407 410 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 AL109918.3-201ENST00000603072 338 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.11□□□□□ -2.07
ACTN1P12814 CENPCP1-201ENST00000533085 2578 ntBASIC2.11□□□□□ -2.07
ACTN1P12814 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
ACTN1P12814 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.11□□□□□ -2.07
ACTN1P12814 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ACTN1P12814 RNU6-23P-201ENST00000363283 107 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 RNU6-1305P-201ENST00000364353 104 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 Y_RNA.332-201ENST00000365271 113 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 RNU6-418P-201ENST00000384035 107 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 SNORA17.3-201ENST00000391159 129 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 SNORA75.6-201ENST00000391318 127 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ACTN1P12814 MIR190B-201ENST00000401119 79 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 AL033519.2-201ENST00000403958 392 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 AL512604.1-201ENST00000404812 257 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 AC123900.1-201ENST00000420390 96 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 MIR2053-201ENST00000459295 91 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 AL163540.1-201ENST00000485382 386 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 RPL17P19-201ENST00000489069 552 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 FGF7P4-201ENST00000509595 295 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 MTND3P22-201ENST00000510932 243 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 AC093303.1-201ENST00000514549 295 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 RNU6-264P-201ENST00000517134 104 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.1□□□□□ -2.07
ACTN1P12814 MIR3683-201ENST00000580847 82 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 MIR4753-201ENST00000585119 83 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 RPL17P51-201ENST00000605218 238 ntBASIC2.1□□□□□ -2.07
ACTN1P12814 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms