Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.72□□□□□ -2.13
KRT3P12035 YWHAEP4-201ENST00000505390 198 ntBASIC1.72□□□□□ -2.13
KRT3P12035 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
KRT3P12035 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
KRT3P12035 RNA5SP384-201ENST00000516615 116 ntBASIC1.72□□□□□ -2.13
KRT3P12035 AC134698.4-201ENST00000523451 826 ntBASIC1.72□□□□□ -2.13
KRT3P12035 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.72□□□□□ -2.13
KRT3P12035 AC087441.2-201ENST00000529141 262 ntBASIC1.72□□□□□ -2.13
KRT3P12035 AC005730.3-201ENST00000583067 366 ntBASIC1.72□□□□□ -2.13
KRT3P12035 AC005786.1-201ENST00000588553 154 ntBASIC1.72□□□□□ -2.13
KRT3P12035 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.72□□□□□ -2.13
KRT3P12035 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
KRT3P12035 AC100812.1-201ENST00000607622 580 ntBASIC1.72□□□□□ -2.13
KRT3P12035 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.72□□□□□ -2.13
KRT3P12035 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.72□□□□□ -2.13
KRT3P12035 AC099654.5-201ENST00000636479 350 ntBASIC1.72□□□□□ -2.13
KRT3P12035 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
KRT3P12035 RNU6-222P-201ENST00000362438 107 ntBASIC1.71□□□□□ -2.14
KRT3P12035 RNY1P16-201ENST00000363063 111 ntBASIC1.71□□□□□ -2.14
KRT3P12035 Y_RNA.106-201ENST00000363189 100 ntBASIC1.71□□□□□ -2.14
KRT3P12035 RNU6-280P-201ENST00000364145 104 ntBASIC1.71□□□□□ -2.14
KRT3P12035 RNU4-42P-201ENST00000364738 142 ntBASIC1.71□□□□□ -2.14
KRT3P12035 MIR504-201ENST00000385065 83 ntBASIC1.71□□□□□ -2.14
KRT3P12035 MIR1253-201ENST00000408273 105 ntBASIC1.71□□□□□ -2.14
KRT3P12035 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
KRT3P12035 AC092423.1-201ENST00000430165 186 ntBASIC1.71□□□□□ -2.14
KRT3P12035 USP9YP16-201ENST00000430287 407 ntBASIC1.71□□□□□ -2.14
KRT3P12035 USP9YP23-201ENST00000455085 407 ntBASIC1.71□□□□□ -2.14
KRT3P12035 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.71□□□□□ -2.14
KRT3P12035 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.71□□□□□ -2.14
KRT3P12035 RNU1-131P-201ENST00000458943 161 ntBASIC1.71□□□□□ -2.14
KRT3P12035 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.71□□□□□ -2.14
KRT3P12035 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.71□□□□□ -2.14
KRT3P12035 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
KRT3P12035 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.71□□□□□ -2.14
KRT3P12035 AC027288.2-201ENST00000553028 243 ntBASIC1.71□□□□□ -2.14
KRT3P12035 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
KRT3P12035 SNORD11B-201ENST00000607707 90 ntBASIC1.71□□□□□ -2.14
KRT3P12035 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.71□□□□□ -2.14
KRT3P12035 AC099654.14-201ENST00000638599 341 ntBASIC1.71□□□□□ -2.14
KRT3P12035 Y_RNA.179-201ENST00000363844 90 ntBASIC1.7□□□□□ -2.14
KRT3P12035 RNU6-593P-201ENST00000364716 112 ntBASIC1.7□□□□□ -2.14
KRT3P12035 Y_RNA.339-201ENST00000365325 102 ntBASIC1.7□□□□□ -2.14
KRT3P12035 Y_RNA.404-201ENST00000383978 102 ntBASIC1.7□□□□□ -2.14
KRT3P12035 RNU6-17P-201ENST00000384245 107 ntBASIC1.7□□□□□ -2.14
KRT3P12035 RNU6-18P-201ENST00000384527 107 ntBASIC1.7□□□□□ -2.14
KRT3P12035 RN7SKP101-201ENST00000411376 320 ntBASIC1.7□□□□□ -2.14
KRT3P12035 PDCL2P1-201ENST00000419302 352 ntBASIC1.7□□□□□ -2.14
KRT3P12035 CYCSP49-201ENST00000420810 319 ntBASIC1.7□□□□□ -2.14
KRT3P12035 MTND3P23-201ENST00000431980 347 ntBASIC1.7□□□□□ -2.14
KRT3P12035 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.7□□□□□ -2.14
KRT3P12035 AL121890.1-201ENST00000435457 205 ntBASIC1.7□□□□□ -2.14
KRT3P12035 HMGN2P34-201ENST00000437647 269 ntBASIC1.7□□□□□ -2.14
KRT3P12035 Y_RNA.635-201ENST00000459041 101 ntBASIC1.7□□□□□ -2.14
KRT3P12035 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
KRT3P12035 AC027575.1-201ENST00000481064 460 ntBASIC1.7□□□□□ -2.14
KRT3P12035 AC116353.2-201ENST00000505332 712 ntBASIC1.7□□□□□ -2.14
KRT3P12035 SCARNA16.2-201ENST00000516520 172 ntBASIC1.7□□□□□ -2.14
KRT3P12035 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
KRT3P12035 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.7□□□□□ -2.14
KRT3P12035 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
KRT3P12035 AC016727.1-205ENST00000605437 569 ntBASIC1.7□□□□□ -2.14
KRT3P12035 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.7□□□□□ -2.14
KRT3P12035 AL359757.2-201ENST00000624309 274 ntBASIC1.7□□□□□ -2.14
KRT3P12035 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KRT3P12035 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
KRT3P12035 MTND5P16-201ENST00000460269 1703 ntBASIC1.69□□□□□ -2.14
KRT3P12035 RNU1-96P-201ENST00000364163 162 ntBASIC1.69□□□□□ -2.14
KRT3P12035 Y_RNA.390-201ENST00000383932 102 ntBASIC1.69□□□□□ -2.14
KRT3P12035 RNU6-245P-201ENST00000384020 107 ntBASIC1.69□□□□□ -2.14
KRT3P12035 RNU6-975P-201ENST00000384296 105 ntBASIC1.69□□□□□ -2.14
KRT3P12035 SNORA48.1-201ENST00000390879 135 ntBASIC1.69□□□□□ -2.14
KRT3P12035 RNU6-159P-201ENST00000391080 106 ntBASIC1.69□□□□□ -2.14
KRT3P12035 FGF7P8-201ENST00000402994 292 ntBASIC1.69□□□□□ -2.14
KRT3P12035 RNU4-14P-201ENST00000410858 122 ntBASIC1.69□□□□□ -2.14
KRT3P12035 RNU6-370P-201ENST00000411008 104 ntBASIC1.69□□□□□ -2.14
KRT3P12035 AC138393.2-201ENST00000414742 246 ntBASIC1.69□□□□□ -2.14
KRT3P12035 AC060773.1-201ENST00000421698 310 ntBASIC1.69□□□□□ -2.14
KRT3P12035 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.69□□□□□ -2.14
KRT3P12035 HMGN2P9-201ENST00000476875 229 ntBASIC1.69□□□□□ -2.14
KRT3P12035 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.69□□□□□ -2.14
KRT3P12035 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
KRT3P12035 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
KRT3P12035 MIR3683-201ENST00000580847 82 ntBASIC1.69□□□□□ -2.14
KRT3P12035 AC005014.2-201ENST00000607795 599 ntBASIC1.69□□□□□ -2.14
KRT3P12035 AC126177.8-201ENST00000618339 1015 ntBASIC1.69□□□□□ -2.14
KRT3P12035 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
KRT3P12035 MTND4P12-201ENST00000498999 1377 ntBASIC1.69□□□□□ -2.14
KRT3P12035 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
KRT3P12035 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.68□□□□□ -2.14
KRT3P12035 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRT3P12035 Y_RNA.415-201ENST00000384012 112 ntBASIC1.68□□□□□ -2.14
KRT3P12035 RNU6-793P-201ENST00000384233 104 ntBASIC1.68□□□□□ -2.14
KRT3P12035 Y_RNA.490-201ENST00000384413 102 ntBASIC1.68□□□□□ -2.14
KRT3P12035 MIR190B-201ENST00000401119 79 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AC007098.1-201ENST00000420122 367 ntBASIC1.68□□□□□ -2.14
KRT3P12035 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.68□□□□□ -2.14
KRT3P12035 RBMX2P4-201ENST00000441256 376 ntBASIC1.68□□□□□ -2.14
KRT3P12035 AL357134.1-201ENST00000445848 426 ntBASIC1.68□□□□□ -2.14
KRT3P12035 RPL30P15-201ENST00000457129 321 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms