Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
TPM1P09493 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
TPM1P09493 MIR337-201ENST00000362281 93 ntBASIC0.39□□□□□ -2.35
TPM1P09493 RNU2-29P-201ENST00000410423 189 ntBASIC0.39□□□□□ -2.35
TPM1P09493 RPL31P35-201ENST00000431058 377 ntBASIC0.39□□□□□ -2.35
TPM1P09493 AC004854.1-201ENST00000440356 349 ntBASIC0.39□□□□□ -2.35
TPM1P09493 TPT1P7-201ENST00000458300 517 ntBASIC0.39□□□□□ -2.35
TPM1P09493 RNU7-138P-201ENST00000459479 64 ntBASIC0.39□□□□□ -2.35
TPM1P09493 RNU6-311P-201ENST00000516224 102 ntBASIC0.39□□□□□ -2.35
TPM1P09493 RNU1-117P-201ENST00000517041 158 ntBASIC0.39□□□□□ -2.35
TPM1P09493 RNA5SP454-201ENST00000517231 127 ntBASIC0.39□□□□□ -2.35
TPM1P09493 AC106038.2-201ENST00000520706 568 ntBASIC0.39□□□□□ -2.35
TPM1P09493 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.39□□□□□ -2.35
TPM1P09493 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.39□□□□□ -2.35
TPM1P09493 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.39□□□□□ -2.35
TPM1P09493 U8.16-201ENST00000391279 133 ntBASIC0.38□□□□□ -2.35
TPM1P09493 AL031577.2-201ENST00000404133 280 ntBASIC0.38□□□□□ -2.35
TPM1P09493 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.38□□□□□ -2.35
TPM1P09493 MTND3P9-201ENST00000429526 346 ntBASIC0.38□□□□□ -2.35
TPM1P09493 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.38□□□□□ -2.35
TPM1P09493 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.38□□□□□ -2.35
TPM1P09493 RNU6-1053P-201ENST00000515930 101 ntBASIC0.38□□□□□ -2.35
TPM1P09493 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
TPM1P09493 AC022868.1-201ENST00000517767 391 ntBASIC0.38□□□□□ -2.35
TPM1P09493 AL137161.1-201ENST00000532231 390 ntBASIC0.38□□□□□ -2.35
TPM1P09493 FGF7P1-201ENST00000582820 288 ntBASIC0.38□□□□□ -2.35
TPM1P09493 AC136443.5-201ENST00000603741 370 ntBASIC0.38□□□□□ -2.35
TPM1P09493 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
TPM1P09493 Y_RNA.338-201ENST00000365320 114 ntBASIC0.37□□□□□ -2.35
TPM1P09493 RNU6-606P-201ENST00000384721 111 ntBASIC0.37□□□□□ -2.35
TPM1P09493 SNORD89-201ENST00000390981 114 ntBASIC0.37□□□□□ -2.35
TPM1P09493 RNA5SP504-201ENST00000410676 117 ntBASIC0.37□□□□□ -2.35
TPM1P09493 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.37□□□□□ -2.35
TPM1P09493 AC093850.1-201ENST00000454121 251 ntBASIC0.37□□□□□ -2.35
TPM1P09493 snoU13.25-201ENST00000458945 104 ntBASIC0.37□□□□□ -2.35
TPM1P09493 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
TPM1P09493 MRPS36P4-201ENST00000534436 298 ntBASIC0.37□□□□□ -2.35
TPM1P09493 MTND1P8-201ENST00000571424 950 ntBASIC0.37□□□□□ -2.35
TPM1P09493 MTATP6P3-201ENST00000581686 676 ntBASIC0.37□□□□□ -2.35
TPM1P09493 MIR548AB-201ENST00000584917 84 ntBASIC0.37□□□□□ -2.35
TPM1P09493 AC234772.3-201ENST00000602277 528 ntBASIC0.37□□□□□ -2.35
TPM1P09493 SNORD11B-201ENST00000607707 90 ntBASIC0.37□□□□□ -2.35
TPM1P09493 RMST_3.1-201ENST00000611651 109 ntBASIC0.37□□□□□ -2.35
TPM1P09493 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.37□□□□□ -2.35
TPM1P09493 AC134026.1-201ENST00000623249 2239 ntBASIC0.37□□□□□ -2.35
TPM1P09493 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.36□□□□□ -2.35
TPM1P09493 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.36□□□□□ -2.35
TPM1P09493 MTND2P14-201ENST00000482139 351 ntBASIC0.36□□□□□ -2.35
TPM1P09493 SNORD111.1-201ENST00000516421 86 ntBASIC0.36□□□□□ -2.35
TPM1P09493 RNU6-430P-201ENST00000517078 107 ntBASIC0.36□□□□□ -2.35
TPM1P09493 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.36□□□□□ -2.35
TPM1P09493 AC004223.2-201ENST00000590309 544 ntBASIC0.36□□□□□ -2.35
TPM1P09493 7SK.10-201ENST00000621414 298 ntBASIC0.36□□□□□ -2.35
TPM1P09493 ZNF204P-201ENST00000416749 2397 ntBASIC0.35□□□□□ -2.35
TPM1P09493 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
TPM1P09493 RPL23AP50-201ENST00000434149 455 ntBASIC0.35□□□□□ -2.35
TPM1P09493 AC104332.1-201ENST00000440471 797 ntBASIC0.35□□□□□ -2.35
TPM1P09493 U8.21-201ENST00000459536 136 ntBASIC0.35□□□□□ -2.35
TPM1P09493 AF186996.7-201ENST00000492781 209 ntBASIC0.35□□□□□ -2.35
TPM1P09493 RNU6-1110P-201ENST00000516462 101 ntBASIC0.35□□□□□ -2.35
TPM1P09493 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM1P09493 AC131055.1-201ENST00000584626 316 ntBASIC0.35□□□□□ -2.35
TPM1P09493 MIR6516-201ENST00000630554 81 ntBASIC0.35□□□□□ -2.35
TPM1P09493 RNU6-1266P-201ENST00000362794 105 ntBASIC0.34□□□□□ -2.36
TPM1P09493 Y_RNA.123-201ENST00000363338 102 ntBASIC0.34□□□□□ -2.36
TPM1P09493 Y_RNA.265-201ENST00000364677 108 ntBASIC0.34□□□□□ -2.36
TPM1P09493 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TPM1P09493 RNU1-119P-201ENST00000391122 165 ntBASIC0.34□□□□□ -2.36
TPM1P09493 MIR1185-2-201ENST00000408687 86 ntBASIC0.34□□□□□ -2.36
TPM1P09493 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM1P09493 MTCO2P12-201ENST00000427426 682 ntBASIC0.34□□□□□ -2.36
TPM1P09493 AC098934.3-201ENST00000430450 190 ntBASIC0.34□□□□□ -2.36
TPM1P09493 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM1P09493 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM1P09493 OR9P1P-201ENST00000496431 281 ntBASIC0.34□□□□□ -2.36
TPM1P09493 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.34□□□□□ -2.36
TPM1P09493 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TPM1P09493 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.34□□□□□ -2.36
TPM1P09493 FRG2DP-202ENST00000566967 323 ntBASIC0.34□□□□□ -2.36
TPM1P09493 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.34□□□□□ -2.36
TPM1P09493 AL391834.2-201ENST00000609982 546 ntBASIC0.34□□□□□ -2.36
TPM1P09493 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
TPM1P09493 AC137590.2-201ENST00000619709 240 ntBASIC0.34□□□□□ -2.36
TPM1P09493 Y_RNA.330-201ENST00000365230 109 ntBASIC0.33□□□□□ -2.36
TPM1P09493 Z99497.1-201ENST00000421282 135 ntBASIC0.33□□□□□ -2.36
TPM1P09493 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.33□□□□□ -2.36
TPM1P09493 AL162725.1-201ENST00000435405 301 ntBASIC0.33□□□□□ -2.36
TPM1P09493 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TPM1P09493 NDUFB4P10-201ENST00000452541 359 ntBASIC0.33□□□□□ -2.36
TPM1P09493 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.33□□□□□ -2.36
TPM1P09493 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
TPM1P09493 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.33□□□□□ -2.36
TPM1P09493 RNU7-12P-201ENST00000516030 62 ntBASIC0.33□□□□□ -2.36
TPM1P09493 MTND4LP26-201ENST00000518144 282 ntBASIC0.33□□□□□ -2.36
TPM1P09493 AC109810.1-201ENST00000534066 224 ntBASIC0.33□□□□□ -2.36
TPM1P09493 AC004223.4-201ENST00000612426 332 ntBASIC0.33□□□□□ -2.36
TPM1P09493 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.33□□□□□ -2.36
TPM1P09493 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
TPM1P09493 RNA5SP264-201ENST00000363115 107 ntBASIC0.32□□□□□ -2.36
TPM1P09493 RNU6-456P-201ENST00000384493 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms