Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
CD48P09326 AC080128.1-201ENST00000474389 1917 ntBASIC2.09□□□□□ -2.08
CD48P09326 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CD48P09326 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.08□□□□□ -2.08
CD48P09326 RNU6-222P-201ENST00000362438 107 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU6-1301P-201ENST00000362724 104 ntBASIC2.08□□□□□ -2.08
CD48P09326 Y_RNA.153-201ENST00000363615 91 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU5F-3P-201ENST00000363767 117 ntBASIC2.08□□□□□ -2.08
CD48P09326 U3.9-201ENST00000363823 204 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU4-50P-201ENST00000364361 141 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU6-245P-201ENST00000384020 107 ntBASIC2.08□□□□□ -2.08
CD48P09326 SNORA6-201ENST00000384033 151 ntBASIC2.08□□□□□ -2.08
CD48P09326 MIR29B2-201ENST00000385055 81 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU6-1093P-201ENST00000391194 107 ntBASIC2.08□□□□□ -2.08
CD48P09326 MIR208B-201ENST00000401172 77 ntBASIC2.08□□□□□ -2.08
CD48P09326 MIR548F4-201ENST00000408515 105 ntBASIC2.08□□□□□ -2.08
CD48P09326 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CD48P09326 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.08□□□□□ -2.08
CD48P09326 AC073910.1-201ENST00000445047 438 ntBASIC2.08□□□□□ -2.08
CD48P09326 MTCO3P8-201ENST00000453691 755 ntBASIC2.08□□□□□ -2.08
CD48P09326 HMGB3P3-201ENST00000510526 400 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
CD48P09326 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
CD48P09326 Y_RNA.715-201ENST00000517082 110 ntBASIC2.08□□□□□ -2.08
CD48P09326 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.08□□□□□ -2.08
CD48P09326 AL117187.1-201ENST00000555482 181 ntBASIC2.08□□□□□ -2.08
CD48P09326 AL355297.3-201ENST00000604082 446 ntBASIC2.08□□□□□ -2.08
CD48P09326 AC124312.5-201ENST00000604451 268 ntBASIC2.08□□□□□ -2.08
CD48P09326 RPL17P51-201ENST00000605218 238 ntBASIC2.08□□□□□ -2.08
CD48P09326 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
CD48P09326 AC010205.1-201ENST00000616668 449 ntBASIC2.08□□□□□ -2.08
CD48P09326 ZNF72P-201ENST00000425869 1908 ntBASIC2.08□□□□□ -2.08
CD48P09326 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.08□□□□□ -2.08
CD48P09326 RNU6-280P-201ENST00000364145 104 ntBASIC2.07□□□□□ -2.08
CD48P09326 SNORD32B-201ENST00000364460 84 ntBASIC2.07□□□□□ -2.08
CD48P09326 RNU6-1145P-201ENST00000384246 107 ntBASIC2.07□□□□□ -2.08
CD48P09326 Y_RNA.459-201ENST00000384251 102 ntBASIC2.07□□□□□ -2.08
CD48P09326 RNU6-318P-201ENST00000384283 103 ntBASIC2.07□□□□□ -2.08
CD48P09326 RNU6-1105P-201ENST00000384774 107 ntBASIC2.07□□□□□ -2.08
CD48P09326 MIR95-201ENST00000385072 81 ntBASIC2.07□□□□□ -2.08
CD48P09326 MIR628-201ENST00000385229 95 ntBASIC2.07□□□□□ -2.08
CD48P09326 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CD48P09326 RNA5SP425-201ENST00000410336 112 ntBASIC2.07□□□□□ -2.08
CD48P09326 RN7SKP192-201ENST00000411291 327 ntBASIC2.07□□□□□ -2.08
CD48P09326 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.07□□□□□ -2.08
CD48P09326 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
CD48P09326 FCF1P4-201ENST00000448326 183 ntBASIC2.07□□□□□ -2.08
CD48P09326 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.07□□□□□ -2.08
CD48P09326 AC145146.1-201ENST00000496370 254 ntBASIC2.07□□□□□ -2.08
CD48P09326 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.07□□□□□ -2.08
CD48P09326 RNU6-1046P-201ENST00000516538 107 ntBASIC2.07□□□□□ -2.08
CD48P09326 RN7SKP49-201ENST00000516675 260 ntBASIC2.07□□□□□ -2.08
CD48P09326 AC034114.1-201ENST00000520293 285 ntBASIC2.07□□□□□ -2.08
CD48P09326 AC105245.1-201ENST00000581934 244 ntBASIC2.07□□□□□ -2.08
CD48P09326 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
CD48P09326 MIR3616-201ENST00000584070 92 ntBASIC2.07□□□□□ -2.08
CD48P09326 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.07□□□□□ -2.08
CD48P09326 RPS29P30-201ENST00000600975 111 ntBASIC2.07□□□□□ -2.08
CD48P09326 AL713866.2-201ENST00000603579 219 ntBASIC2.07□□□□□ -2.08
CD48P09326 AC069294.1-201ENST00000608397 350 ntBASIC2.07□□□□□ -2.08
CD48P09326 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
CD48P09326 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CD48P09326 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD48P09326 snoU2_19.1-201ENST00000362361 80 ntBASIC2.06□□□□□ -2.08
CD48P09326 RNU1-76P-201ENST00000362903 159 ntBASIC2.06□□□□□ -2.08
CD48P09326 Y_RNA.276-201ENST00000364732 109 ntBASIC2.06□□□□□ -2.08
CD48P09326 RNU6-708P-201ENST00000384217 107 ntBASIC2.06□□□□□ -2.08
CD48P09326 MIR329-1-201ENST00000385028 80 ntBASIC2.06□□□□□ -2.08
CD48P09326 SNORA46.1-201ENST00000391069 153 ntBASIC2.06□□□□□ -2.08
CD48P09326 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.06□□□□□ -2.08
CD48P09326 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
CD48P09326 DPH3P2-201ENST00000422618 250 ntBASIC2.06□□□□□ -2.08
CD48P09326 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.06□□□□□ -2.08
CD48P09326 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.06□□□□□ -2.08
CD48P09326 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.06□□□□□ -2.08
CD48P09326 RNU6-1012P-201ENST00000516606 109 ntBASIC2.06□□□□□ -2.08
CD48P09326 AC022868.1-201ENST00000517767 391 ntBASIC2.06□□□□□ -2.08
CD48P09326 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.06□□□□□ -2.08
CD48P09326 AC026470.2-201ENST00000561492 181 ntBASIC2.06□□□□□ -2.08
CD48P09326 UBL5P4-201ENST00000562584 236 ntBASIC2.06□□□□□ -2.08
CD48P09326 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.06□□□□□ -2.08
CD48P09326 AC125232.2-201ENST00000592457 143 ntBASIC2.06□□□□□ -2.08
CD48P09326 SNRPGP20-201ENST00000604477 205 ntBASIC2.06□□□□□ -2.08
CD48P09326 PRR13P7-201ENST00000605538 430 ntBASIC2.06□□□□□ -2.08
CD48P09326 AL121655.1-201ENST00000605811 308 ntBASIC2.06□□□□□ -2.08
CD48P09326 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.06□□□□□ -2.08
CD48P09326 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
CD48P09326 MIR219B-201ENST00000637023 88 ntBASIC2.06□□□□□ -2.08
CD48P09326 AC135776.4-201ENST00000624300 1904 ntBASIC2.05□□□□□ -2.08
CD48P09326 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.05□□□□□ -2.08
CD48P09326 RNU1-62P-201ENST00000362599 164 ntBASIC2.05□□□□□ -2.08
CD48P09326 RNU6-461P-201ENST00000364195 107 ntBASIC2.05□□□□□ -2.08
CD48P09326 RNU6-450P-201ENST00000364654 107 ntBASIC2.05□□□□□ -2.08
CD48P09326 RNU6-26P-201ENST00000383985 107 ntBASIC2.05□□□□□ -2.08
CD48P09326 RNU6-611P-201ENST00000384276 104 ntBASIC2.05□□□□□ -2.08
CD48P09326 MIR320B2-201ENST00000408479 138 ntBASIC2.05□□□□□ -2.08
CD48P09326 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.05□□□□□ -2.08
CD48P09326 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.05□□□□□ -2.08
CD48P09326 SDAD1P3-201ENST00000427380 333 ntBASIC2.05□□□□□ -2.08
CD48P09326 CBX3P6-201ENST00000430257 527 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms