Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DPB1P04440 SDAD1P3-201ENST00000427380 333 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 MTCO3P29-201ENST00000432119 779 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AC112492.4-201ENST00000456549 352 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 RPL36AP21-201ENST00000490372 323 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AC109635.3-201ENST00000529536 185 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.11□□□□□ -2.23
HLA-DPB1P04440 MIR4742-201ENST00000581069 85 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 POLR3GP2-201ENST00000588366 668 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AP003465.2-201ENST00000602571 373 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AC015540.1-201ENST00000615828 501 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DPB1P04440 AC008873.1-201ENST00000625051 138 ntBASIC1.11□□□□□ -2.23
HLA-DPB1P04440 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DPB1P04440 ICE2P2-201ENST00000483823 2787 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.100-201ENST00000363141 102 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 SNORD1A-201ENST00000364968 72 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 RNA5SP467-201ENST00000391274 118 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DPB1P04440 AC114982.1-201ENST00000469402 321 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 RPS26P55-201ENST00000471178 356 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 AC004223.1-201ENST00000479840 271 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 RPL30P10-201ENST00000488148 337 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 TRBVA-201ENST00000498804 316 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 RNA5SP458-201ENST00000516188 119 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 AK6P2-201ENST00000549020 471 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 AC027288.2-201ENST00000553028 243 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 AC097065.2-201ENST00000608159 533 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 AL078596.1-201ENST00000624856 447 ntBASIC1.1□□□□□ -2.23
HLA-DPB1P04440 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DPB1P04440 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.67-201ENST00000362870 100 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 SNORD87-201ENST00000364849 89 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.318-201ENST00000365131 97 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 MIR150-201ENST00000385048 84 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 EBAG9P1-201ENST00000418955 543 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 ZNF885P-201ENST00000420174 1098 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 RPS27P16-201ENST00000425758 201 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 MTND3P21-201ENST00000433774 331 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 DAP3P1-201ENST00000441522 278 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.09□□□□□ -2.23
HLA-DPB1P04440 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DPB1P04440 snoU13.27-201ENST00000459278 104 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DPB1P04440 RNU6-344P-201ENST00000516635 111 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 RNU6-273P-201ENST00000516937 96 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 RNU6-58P-201ENST00000517143 103 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.09□□□□□ -2.23
HLA-DPB1P04440 TPRKBP2-201ENST00000565969 475 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AC019193.3-201ENST00000609144 554 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AL157834.3-201ENST00000615543 103 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AC006504.8-201ENST00000621046 635 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 AL359697.1-201ENST00000624879 587 ntBASIC1.09□□□□□ -2.23
HLA-DPB1P04440 Y_RNA.3-201ENST00000362331 103 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNU6-873P-201ENST00000363833 107 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 SNORD115-8-201ENST00000363856 82 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 SNORD115-32-201ENST00000364079 82 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNU4-9P-201ENST00000364951 139 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 SNORD115-38-201ENST00000365037 82 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.319-201ENST00000365138 92 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 SNORD116-11-201ENST00000383882 92 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.402-201ENST00000383972 102 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 MIR194-1-201ENST00000384892 85 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 MIR181A1-201ENST00000385026 110 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNA5SP109-201ENST00000391010 116 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AL606517.2-201ENST00000442855 241 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNA5SP481-201ENST00000516814 122 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNU6-1314P-201ENST00000517139 104 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AC025647.1-201ENST00000517879 253 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DPB1P04440 UBL5P4-201ENST00000562584 236 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 MIR4422-201ENST00000581938 83 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 snoZ196.1-201ENST00000625269 89 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 U6.108-201ENST00000637764 58 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 MTND4P12-201ENST00000498999 1377 ntBASIC1.08□□□□□ -2.24
HLA-DPB1P04440 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
HLA-DPB1P04440 RNU6-727P-201ENST00000363592 107 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RNY4P14-201ENST00000363656 96 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.415-201ENST00000384012 112 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RPL30P16-201ENST00000419341 429 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 AC027119.1-201ENST00000440877 241 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
HLA-DPB1P04440 RPS29P29-201ENST00000456396 171 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms