Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.38□□□□□ -2.47
SPTA1P02549 AC023157.2-201ENST00000540596 141 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AC110760.3-201ENST00000598794 467 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AL354696.1-201ENST00000614652 497 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AL359547.2-201ENST00000615810 418 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.38□□□□□ -2.47
SPTA1P02549 AC103706.2-201ENST00000638080 240 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNU6-289P-201ENST00000364093 107 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 SNORA1.1-201ENST00000364671 133 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 MIR106A-201ENST00000384870 81 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNU4-30P-201ENST00000410245 143 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 NFU1P2-201ENST00000448700 469 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.38□□□□□ -2.47
SPTA1P02549 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.38□□□□□ -2.47
SPTA1P02549 AC093809.1-201ENST00000509155 340 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNA5SP180-201ENST00000516181 101 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 AC103996.1-201ENST00000555468 102 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 MIR4441-201ENST00000582623 100 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 MIR6079-201ENST00000635807 62 ntBASIC-0.38□□□□□ -2.47
SPTA1P02549 RNU6-562P-201ENST00000362731 107 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 SNORA72.1-201ENST00000363485 129 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 RNU6-487P-201ENST00000365430 104 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 RNA5SP95-201ENST00000410319 137 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MTCO2P23-201ENST00000425216 680 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MTND2P6-201ENST00000455337 1030 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 RPL17P19-201ENST00000489069 552 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 RNU6-475P-201ENST00000516073 104 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 AC069545.1-201ENST00000605671 358 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 AC063943.3-201ENST00000615562 356 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MIRLET7C-201ENST00000362160 84 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 SNORA32.2-201ENST00000384049 122 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MCFD2P1-201ENST00000417812 300 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 USP9YP21-201ENST00000420603 432 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MTND1P4-201ENST00000435196 415 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 RN7SKP164-201ENST00000516138 266 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 AC023050.3-201ENST00000541142 333 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.39□□□□□ -2.47
SPTA1P02549 MIR4753-201ENST00000585119 83 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 AC068790.2-201ENST00000602601 557 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MIR15A-201ENST00000607334 83 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 AC007684.1-201ENST00000609671 477 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
SPTA1P02549 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-552P-201ENST00000362869 119 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNY4P27-201ENST00000363341 96 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-744P-201ENST00000365557 107 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-650P-201ENST00000365658 111 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-843P-201ENST00000384454 104 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-125P-201ENST00000384505 107 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR520C-201ENST00000385005 87 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AL590135.1-201ENST00000422215 156 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC019205.3-201ENST00000424573 156 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MTATP6P16-201ENST00000434543 526 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC007969.2-201ENST00000441891 191 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC016700.2-201ENST00000446011 156 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC015911.1-201ENST00000495111 156 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.4□□□□□ -2.47
SPTA1P02549 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR4789-201ENST00000577469 82 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC115989.2-201ENST00000578640 563 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR3612-201ENST00000579753 87 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AL138889.2-201ENST00000603883 242 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC012467.1-201ENST00000607740 256 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC098679.4-201ENST00000624241 654 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 U4.7-201ENST00000638126 106 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNA5SP192-201ENST00000364404 120 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-534P-201ENST00000364877 106 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-119P-201ENST00000364882 107 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR217-201ENST00000384817 110 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-205P-201ENST00000390858 107 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MTND3P20-201ENST00000407663 186 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.4□□□□□ -2.47
SPTA1P02549 AL365338.1-201ENST00000422282 858 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MED13P1-201ENST00000428342 171 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 TIMM9P3-201ENST00000428659 274 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MTCO1P5-201ENST00000433573 344 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.4□□□□□ -2.47
SPTA1P02549 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPTA1P02549 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPTA1P02549 AC122134.1-202ENST00000569111 1201 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR5006-201ENST00000583027 110 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR4293-201ENST00000584305 78 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 MIR548AD-201ENST00000584780 82 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 AC005176.2-201ENST00000596933 147 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 BCRP9-201ENST00000605312 388 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.4□□□□□ -2.47
SPTA1P02549 RNU6-212P-201ENST00000362642 104 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 SNORD32A-201ENST00000364805 84 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
SPTA1P02549 MIR1302-7-201ENST00000408841 72 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 AL139396.1-201ENST00000421137 167 ntBASIC-0.41□□□□□ -2.48
SPTA1P02549 USP9YP28-201ENST00000435142 589 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms