Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL353997.1-201ENST00000432936 108 ntBASIC2.13□□□□□ -2.07
RTN3O95197 MTND4P18-201ENST00000447010 465 ntBASIC2.13□□□□□ -2.07
RTN3O95197 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
RTN3O95197 ATP5J2P3-201ENST00000451550 258 ntBASIC2.13□□□□□ -2.07
RTN3O95197 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.13□□□□□ -2.07
RTN3O95197 RN7SL274P-201ENST00000492268 272 ntBASIC2.13□□□□□ -2.07
RTN3O95197 AC097473.1-201ENST00000508142 408 ntBASIC2.13□□□□□ -2.07
RTN3O95197 RNA5SP458-201ENST00000516188 119 ntBASIC2.13□□□□□ -2.07
RTN3O95197 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
RTN3O95197 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
RTN3O95197 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.13□□□□□ -2.07
RTN3O95197 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.13□□□□□ -2.07
RTN3O95197 AC113139.1-201ENST00000605049 239 ntBASIC2.13□□□□□ -2.07
RTN3O95197 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
RTN3O95197 AL353997.5-201ENST00000618886 171 ntBASIC2.13□□□□□ -2.07
RTN3O95197 AC068205.3-201ENST00000636385 468 ntBASIC2.13□□□□□ -2.07
RTN3O95197 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RTN3O95197 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RTN3O95197 RNU6-793P-201ENST00000384233 104 ntBASIC2.12□□□□□ -2.07
RTN3O95197 RNU6-331P-201ENST00000384724 107 ntBASIC2.12□□□□□ -2.07
RTN3O95197 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RTN3O95197 MIR190B-201ENST00000401119 79 ntBASIC2.12□□□□□ -2.07
RTN3O95197 AL033519.2-201ENST00000403958 392 ntBASIC2.12□□□□□ -2.07
RTN3O95197 RNU2-2P-201ENST00000410396 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
RTN3O95197 RPL23AP50-201ENST00000434149 455 ntBASIC2.12□□□□□ -2.07
RTN3O95197 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.12□□□□□ -2.07
RTN3O95197 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.12□□□□□ -2.07
RTN3O95197 RNVU1-2-201ENST00000516326 135 ntBASIC2.12□□□□□ -2.07
RTN3O95197 SCARNA16.2-201ENST00000516520 172 ntBASIC2.12□□□□□ -2.07
RTN3O95197 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.12□□□□□ -2.07
RTN3O95197 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.12□□□□□ -2.07
RTN3O95197 U2.15-201ENST00000611544 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.16-201ENST00000613119 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.12-201ENST00000613778 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.20-201ENST00000613956 192 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.9-201ENST00000615427 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.11-201ENST00000616345 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.2-201ENST00000616535 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.3-201ENST00000617785 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.19-201ENST00000618602 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 RNU2-1-201ENST00000618664 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.6-201ENST00000619225 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.5-201ENST00000619465 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 U2.10-201ENST00000620268 191 ntBASIC2.12□□□□□ -2.07
RTN3O95197 AC022513.1-201ENST00000624512 117 ntBASIC2.12□□□□□ -2.07
RTN3O95197 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
RTN3O95197 Y_RNA.106-201ENST00000363189 100 ntBASIC2.11□□□□□ -2.07
RTN3O95197 Y_RNA.474-201ENST00000384341 102 ntBASIC2.11□□□□□ -2.07
RTN3O95197 AC019129.1-201ENST00000403786 261 ntBASIC2.11□□□□□ -2.07
RTN3O95197 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
RTN3O95197 AC007098.1-201ENST00000420122 367 ntBASIC2.11□□□□□ -2.07
RTN3O95197 AC016717.1-201ENST00000448918 286 ntBASIC2.11□□□□□ -2.07
RTN3O95197 RNA5SP57-201ENST00000459463 123 ntBASIC2.11□□□□□ -2.07
RTN3O95197 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
RTN3O95197 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.11□□□□□ -2.07
RTN3O95197 RNU6-1213P-201ENST00000517075 94 ntBASIC2.11□□□□□ -2.07
RTN3O95197 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.11□□□□□ -2.07
RTN3O95197 MIR5695-201ENST00000579717 85 ntBASIC2.11□□□□□ -2.07
RTN3O95197 MIR5690-201ENST00000583739 73 ntBASIC2.11□□□□□ -2.07
RTN3O95197 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.11□□□□□ -2.07
RTN3O95197 AC092794.2-201ENST00000620933 563 ntBASIC2.11□□□□□ -2.07
RTN3O95197 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RTN3O95197 Y_RNA.164-201ENST00000363709 102 ntBASIC2.1□□□□□ -2.07
RTN3O95197 RNU6-1188P-201ENST00000363795 107 ntBASIC2.1□□□□□ -2.07
RTN3O95197 Y_RNA.179-201ENST00000363844 90 ntBASIC2.1□□□□□ -2.07
RTN3O95197 Y_RNA.303-201ENST00000364998 94 ntBASIC2.1□□□□□ -2.07
RTN3O95197 RNA5SP504-201ENST00000410676 117 ntBASIC2.1□□□□□ -2.07
RTN3O95197 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.1□□□□□ -2.07
RTN3O95197 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
RTN3O95197 NDUFB4P10-201ENST00000452541 359 ntBASIC2.1□□□□□ -2.07
RTN3O95197 RNU7-57P-201ENST00000459540 60 ntBASIC2.1□□□□□ -2.07
RTN3O95197 RPL17P19-201ENST00000489069 552 ntBASIC2.1□□□□□ -2.07
RTN3O95197 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
RTN3O95197 AC093303.1-201ENST00000514549 295 ntBASIC2.1□□□□□ -2.07
RTN3O95197 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.1□□□□□ -2.07
RTN3O95197 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.1□□□□□ -2.07
RTN3O95197 AC010999.1-201ENST00000611856 324 ntBASIC2.1□□□□□ -2.07
RTN3O95197 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RTN3O95197 MTND5P16-201ENST00000460269 1703 ntBASIC2.09□□□□□ -2.07
RTN3O95197 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.07
RTN3O95197 RNU6-222P-201ENST00000362438 107 ntBASIC2.09□□□□□ -2.07
RTN3O95197 Y_RNA.364-201ENST00000365532 101 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AC009310.1-201ENST00000414414 451 ntBASIC2.09□□□□□ -2.07
RTN3O95197 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN3O95197 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AC091179.3-201ENST00000474761 144 ntBASIC2.09□□□□□ -2.07
RTN3O95197 RNU6-559P-201ENST00000516151 98 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AC004584.2-201ENST00000570407 410 ntBASIC2.09□□□□□ -2.07
RTN3O95197 MIR548S-201ENST00000581352 82 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AL353149.1-201ENST00000610667 244 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AC025253.1-201ENST00000613623 543 ntBASIC2.09□□□□□ -2.07
RTN3O95197 AC005296.1-201ENST00000616145 209 ntBASIC2.09□□□□□ -2.07
RTN3O95197 snoZ196.1-201ENST00000625269 89 ntBASIC2.09□□□□□ -2.07
RTN3O95197 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN3O95197 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
RTN3O95197 RNU6-727P-201ENST00000363592 107 ntBASIC2.08□□□□□ -2.08
RTN3O95197 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms