Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
BEST1O76090 MIR3124-201ENST00000582636 67 ntBASIC1.91□□□□□ -2.1
BEST1O76090 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.91□□□□□ -2.1
BEST1O76090 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
BEST1O76090 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
BEST1O76090 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
BEST1O76090 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
BEST1O76090 Y_RNA.2-201ENST00000362330 96 ntBASIC1.9□□□□□ -2.11
BEST1O76090 RNU6-661P-201ENST00000362409 107 ntBASIC1.9□□□□□ -2.11
BEST1O76090 RNU6-793P-201ENST00000384233 104 ntBASIC1.9□□□□□ -2.11
BEST1O76090 MIR520A-201ENST00000384862 85 ntBASIC1.9□□□□□ -2.11
BEST1O76090 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
BEST1O76090 RNU6-876P-201ENST00000391295 104 ntBASIC1.9□□□□□ -2.11
BEST1O76090 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
BEST1O76090 snoU13.23-201ENST00000458863 104 ntBASIC1.9□□□□□ -2.11
BEST1O76090 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
BEST1O76090 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.9□□□□□ -2.11
BEST1O76090 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.9□□□□□ -2.11
BEST1O76090 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
BEST1O76090 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
BEST1O76090 uc_338.5-201ENST00000611839 155 ntBASIC1.9□□□□□ -2.11
BEST1O76090 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
BEST1O76090 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
BEST1O76090 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.9□□□□□ -2.11
BEST1O76090 AC010615.1-201ENST00000594254 1764 ntBASIC1.9□□□□□ -2.11
BEST1O76090 U3.8-201ENST00000363675 217 ntBASIC1.89□□□□□ -2.11
BEST1O76090 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
BEST1O76090 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
BEST1O76090 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
BEST1O76090 RNA5SP504-201ENST00000410676 117 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC007098.1-201ENST00000420122 367 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC008134.1-201ENST00000420943 193 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC069257.2-201ENST00000441819 155 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.89□□□□□ -2.11
BEST1O76090 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.89□□□□□ -2.11
BEST1O76090 AP000870.1-201ENST00000472927 406 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC116353.2-201ENST00000505332 712 ntBASIC1.89□□□□□ -2.11
BEST1O76090 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
BEST1O76090 UBL5P4-201ENST00000562584 236 ntBASIC1.89□□□□□ -2.11
BEST1O76090 MIR5701-3-201ENST00000578890 82 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC005899.2-201ENST00000584353 90 ntBASIC1.89□□□□□ -2.11
BEST1O76090 MIR5701-1-201ENST00000585138 82 ntBASIC1.89□□□□□ -2.11
BEST1O76090 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.89□□□□□ -2.11
BEST1O76090 MIR5701-2-201ENST00000615634 82 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
BEST1O76090 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
BEST1O76090 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
BEST1O76090 AC099654.5-201ENST00000636479 350 ntBASIC1.89□□□□□ -2.11
BEST1O76090 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
BEST1O76090 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
BEST1O76090 Y_RNA.48-201ENST00000362710 103 ntBASIC1.88□□□□□ -2.11
BEST1O76090 snoU2-30.2-201ENST00000362805 70 ntBASIC1.88□□□□□ -2.11
BEST1O76090 Y_RNA.179-201ENST00000363844 90 ntBASIC1.88□□□□□ -2.11
BEST1O76090 MIR515-2-201ENST00000384883 83 ntBASIC1.88□□□□□ -2.11
BEST1O76090 MIR515-1-201ENST00000384884 83 ntBASIC1.88□□□□□ -2.11
BEST1O76090 MIR10B-201ENST00000385011 110 ntBASIC1.88□□□□□ -2.11
BEST1O76090 RNU6-700P-201ENST00000391043 107 ntBASIC1.88□□□□□ -2.11
BEST1O76090 RNU1-139P-201ENST00000391307 165 ntBASIC1.88□□□□□ -2.11
BEST1O76090 RNU6-57P-201ENST00000411348 103 ntBASIC1.88□□□□□ -2.11
BEST1O76090 MTCO3P29-201ENST00000432119 779 ntBASIC1.88□□□□□ -2.11
BEST1O76090 RNU6-221P-201ENST00000459541 99 ntBASIC1.88□□□□□ -2.11
BEST1O76090 AC093303.1-201ENST00000514549 295 ntBASIC1.88□□□□□ -2.11
BEST1O76090 RNU6-1114P-201ENST00000516022 107 ntBASIC1.88□□□□□ -2.11
BEST1O76090 Y_RNA.670-201ENST00000516255 105 ntBASIC1.88□□□□□ -2.11
BEST1O76090 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
BEST1O76090 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
BEST1O76090 AL355802.3-201ENST00000607571 545 ntBASIC1.88□□□□□ -2.11
BEST1O76090 PISRT1.1-201ENST00000616930 107 ntBASIC1.88□□□□□ -2.11
BEST1O76090 AC022306.2-201ENST00000617563 647 ntBASIC1.88□□□□□ -2.11
BEST1O76090 AC126177.8-201ENST00000618339 1015 ntBASIC1.88□□□□□ -2.11
BEST1O76090 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
BEST1O76090 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
BEST1O76090 Y_RNA.88-201ENST00000363029 99 ntBASIC1.87□□□□□ -2.11
BEST1O76090 SNORA72.2-201ENST00000365028 127 ntBASIC1.87□□□□□ -2.11
BEST1O76090 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
BEST1O76090 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
BEST1O76090 MIR1253-201ENST00000408273 105 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
BEST1O76090 USP9YP16-201ENST00000430287 407 ntBASIC1.87□□□□□ -2.11
BEST1O76090 MTND3P23-201ENST00000431980 347 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC245047.4-201ENST00000433189 144 ntBASIC1.87□□□□□ -2.11
BEST1O76090 USP9YP23-201ENST00000455085 407 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC091179.3-201ENST00000474761 144 ntBASIC1.87□□□□□ -2.11
BEST1O76090 HMGN1P13-201ENST00000505795 138 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
BEST1O76090 Y_RNA.691-201ENST00000516611 103 ntBASIC1.87□□□□□ -2.11
BEST1O76090 RNU6-307P-201ENST00000516743 106 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC084364.2-201ENST00000546924 395 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.87□□□□□ -2.11
BEST1O76090 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC005014.2-201ENST00000607795 599 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC009229.3-201ENST00000608056 282 ntBASIC1.87□□□□□ -2.11
BEST1O76090 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.87□□□□□ -2.11
BEST1O76090 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
BEST1O76090 AC006001.4-201ENST00000622243 395 ntBASIC1.87□□□□□ -2.11
BEST1O76090 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
BEST1O76090 MIR190B-201ENST00000401119 79 ntBASIC1.86□□□□□ -2.11
BEST1O76090 RNU2-7P-201ENST00000410794 178 ntBASIC1.86□□□□□ -2.11
BEST1O76090 MTCYBP10-201ENST00000424905 650 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms