Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDKL5O76039 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDKL5O76039 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.91□□□□□ -1.94
CDKL5O76039 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
CDKL5O76039 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
CDKL5O76039 BX322639.1-202ENST00000423987 2213 ntBASIC2.91□□□□□ -1.94
CDKL5O76039 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CDKL5O76039 MTND5P35-201ENST00000557537 1720 ntBASIC2.9□□□□□ -1.94
CDKL5O76039 Y_RNA.83-201ENST00000363005 113 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 Y_RNA.230-201ENST00000364348 109 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 RNU6-740P-201ENST00000364734 105 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 MIR147B-201ENST00000390185 80 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 RNU6-750P-201ENST00000390946 107 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 CBX3P9-201ENST00000402326 552 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 RNU6-651P-201ENST00000411040 105 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.9□□□□□ -1.95
CDKL5O76039 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.9□□□□□ -1.95
CDKL5O76039 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.9□□□□□ -1.95
CDKL5O76039 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.9□□□□□ -1.95
CDKL5O76039 AC104389.3-201ENST00000445629 235 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 MRPS10P1-201ENST00000448483 130 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 AC007395.1-201ENST00000451333 677 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.9□□□□□ -1.95
CDKL5O76039 AC091179.3-201ENST00000474761 144 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 RN7SKP40-201ENST00000517211 242 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.9□□□□□ -1.95
CDKL5O76039 AC008749.1-201ENST00000597650 306 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 AC010620.2-201ENST00000600135 313 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.9□□□□□ -1.95
CDKL5O76039 AC005520.5-201ENST00000613926 164 ntBASIC2.9□□□□□ -1.95
CDKL5O76039 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.9□□□□□ -1.95
CDKL5O76039 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.9□□□□□ -1.95
CDKL5O76039 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDKL5O76039 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDKL5O76039 SNORA25.1-201ENST00000362326 128 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 RNU6-1010P-201ENST00000362757 107 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 SNORA5B-201ENST00000363786 132 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 Y_RNA.179-201ENST00000363844 90 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 Y_RNA.331-201ENST00000365267 102 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 Y_RNA.418-201ENST00000384029 102 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 RNU6-378P-201ENST00000384324 107 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDKL5O76039 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDKL5O76039 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.89□□□□□ -1.95
CDKL5O76039 AIMP1P2-201ENST00000425294 312 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.89□□□□□ -1.95
CDKL5O76039 UQCRBP2-201ENST00000447827 297 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 SNORA59A-201ENST00000459326 152 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.89□□□□□ -1.95
CDKL5O76039 AC233702.2-202ENST00000562547 291 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 AL391813.1-201ENST00000603098 260 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 AL109809.4-201ENST00000603520 2185 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 AC037487.3-201ENST00000606668 112 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 RNU6-91P-201ENST00000607774 107 ntBASIC2.89□□□□□ -1.95
CDKL5O76039 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDKL5O76039 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.89□□□□□ -1.95
CDKL5O76039 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDKL5O76039 MIR411-201ENST00000362239 96 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 RNU6-727P-201ENST00000363592 107 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 Y_RNA.199-201ENST00000364014 102 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AL390729.2-201ENST00000416137 156 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AC096649.2-201ENST00000416186 393 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 MTCO1P5-201ENST00000433573 344 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.88□□□□□ -1.95
CDKL5O76039 AL109933.2-201ENST00000452651 260 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AL138752.1-201ENST00000452964 351 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AL031183.1-201ENST00000457667 207 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 snoU13.14-201ENST00000459372 104 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 RNU6-625P-201ENST00000459412 107 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AP001324.2-201ENST00000461163 319 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 SNORD116-28-201ENST00000516123 91 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 RNA5SP320-201ENST00000516263 124 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AC018448.1-201ENST00000552843 316 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 RPL21P9-201ENST00000556149 474 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 MIR3923-201ENST00000579521 83 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AL162424.1-201ENST00000602325 221 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 AC006001.4-201ENST00000622243 395 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 ZNF271P-202ENST00000465539 1970 ntBASIC2.88□□□□□ -1.95
CDKL5O76039 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDKL5O76039 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CDKL5O76039 MIR6073-201ENST00000352083 89 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 MIR410-201ENST00000362222 80 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RNU5F-3P-201ENST00000363767 117 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RNU4-56P-201ENST00000364700 142 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 Y_RNA.275-201ENST00000364726 110 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 Y_RNA.383-201ENST00000383855 97 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RNU6-245P-201ENST00000384020 107 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RNU6-793P-201ENST00000384233 104 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RNA5SP201-201ENST00000410316 124 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 ELOCP21-201ENST00000412558 336 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RAB28P5-201ENST00000427490 651 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 POLR2KP2-201ENST00000438155 177 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 IFNA11P-201ENST00000446352 526 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 Y_RNA.644-201ENST00000459006 113 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 RPL23AP70-201ENST00000483361 460 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 AC091959.1-201ENST00000495857 238 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 Y_RNA.674-201ENST00000516362 113 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 AC024405.2-202ENST00000532731 184 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 CBX3P4-201ENST00000538909 354 ntBASIC2.87□□□□□ -1.95
CDKL5O76039 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms