Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC004223.2-201ENST00000590309 544 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AL451064.1-201ENST00000607718 471 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC004832.4-201ENST00000608952 331 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC016597.2-201ENST00000613256 341 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AL607023.1-201ENST00000620045 248 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 U6.114-201ENST00000636407 96 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 U3.9-201ENST00000363823 204 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AF228730.1-201ENST00000397972 663 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 MIR208B-201ENST00000401172 77 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 MTCYBP36-201ENST00000404146 440 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 MIR1253-201ENST00000408273 105 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.22□□□□□ -2.37
SNRNP200O75643 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.22□□□□□ -2.37
SNRNP200O75643 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.22□□□□□ -2.37
SNRNP200O75643 AL031274.1-201ENST00000450334 232 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AL163973.1-201ENST00000484753 577 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 OR9P1P-201ENST00000496431 281 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC079140.5-201ENST00000507882 310 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 RBBP4P6-201ENST00000508098 202 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 SCARNA1-201ENST00000517138 166 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AP001372.4-201ENST00000524889 472 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AP003461.1-201ENST00000528866 78 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.22□□□□□ -2.37
SNRNP200O75643 AC016256.1-201ENST00000547971 354 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.22□□□□□ -2.37
SNRNP200O75643 MIR4999-201ENST00000585029 91 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC010620.1-201ENST00000601088 1102 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC023932.2-201ENST00000603176 175 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AL031281.1-201ENST00000604049 488 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC012557.2-201ENST00000605919 418 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.22□□□□□ -2.37
SNRNP200O75643 MIR7844-201ENST00000616161 122 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 SCARNA4-201ENST00000629045 128 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 SEPT14P19-203ENST00000633205 211 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 ZNF204P-201ENST00000416749 2397 ntBASIC0.22□□□□□ -2.37
SNRNP200O75643 AC073544.1-201ENST00000600110 1595 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 MTND5P17-201ENST00000418405 1603 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SNRNP200O75643 AP000568.1-201ENST00000282964 442 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 RNU4-68P-201ENST00000364314 141 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 RNU6-933P-201ENST00000384424 107 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 RNU6-903P-201ENST00000391270 109 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.21□□□□□ -2.38
SNRNP200O75643 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.21□□□□□ -2.38
SNRNP200O75643 AL009048.1-201ENST00000450437 298 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 PCNPP5-201ENST00000452246 481 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 AC093850.1-201ENST00000454121 251 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 RNU6-344P-201ENST00000516635 111 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 RNU1-142P-201ENST00000516682 145 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SNRNP200O75643 SUB1P2-201ENST00000556401 297 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.21□□□□□ -2.38
SNRNP200O75643 AC004584.2-201ENST00000570407 410 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 AL391840.1-201ENST00000571144 367 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 AC068792.1-201ENST00000621354 417 ntBASIC0.21□□□□□ -2.38
SNRNP200O75643 RNY1P8-201ENST00000383970 114 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 SNORD70.1-201ENST00000391007 85 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 RNA5SP299-201ENST00000391203 116 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AC016909.1-201ENST00000415916 166 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 TIMM9P3-201ENST00000428659 274 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 MTND4P18-201ENST00000447010 465 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.2□□□□□ -2.38
SNRNP200O75643 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU6-947P-201ENST00000516264 106 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU6-1291P-201ENST00000516591 104 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 Vault.3-201ENST00000516676 95 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 MTCO2P4-201ENST00000517968 247 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 MRPS36P3-201ENST00000519284 130 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 MTND2P32-201ENST00000521584 1038 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AC011458.1-201ENST00000604034 617 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AC138749.5-201ENST00000611461 208 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU6-181P-201ENST00000363225 107 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU6-1240P-201ENST00000365155 104 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 SNORA50A-201ENST00000384225 134 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 MIR140-201ENST00000385282 100 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.2□□□□□ -2.38
SNRNP200O75643 AC244098.3-201ENST00000424803 96 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU7-57P-201ENST00000459540 60 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.2□□□□□ -2.38
SNRNP200O75643 AC112204.1-201ENST00000502591 103 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 LRRC34P2-201ENST00000514850 553 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 SNORA19.2-201ENST00000516013 114 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU6-445P-201ENST00000516949 107 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 BNIP3P39-201ENST00000601077 554 ntBASIC0.2□□□□□ -2.38
SNRNP200O75643 RNU6-222P-201ENST00000362438 107 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 RNU6-227P-201ENST00000362865 103 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 SNORA33-201ENST00000363664 130 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 MIR526A1-201ENST00000384897 85 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
SNRNP200O75643 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.19□□□□□ -2.38
SNRNP200O75643 AC005534.2-201ENST00000431047 433 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.19□□□□□ -2.38
SNRNP200O75643 snoU13.21-201ENST00000459368 105 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 HMGN2P26-201ENST00000463169 339 ntBASIC0.19□□□□□ -2.38
SNRNP200O75643 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.19□□□□□ -2.38
SNRNP200O75643 AC091874.1-201ENST00000511402 339 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms