Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3AO75631 MIR338-201ENST00000636369 67 ntBASIC1.21□□□□□ -2.22
UPK3AO75631 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.21□□□□□ -2.22
UPK3AO75631 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.21□□□□□ -2.22
UPK3AO75631 Y_RNA.38-201ENST00000362617 102 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 RNU6-451P-201ENST00000362921 107 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 RNY1P10-201ENST00000363268 113 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 RNU6-95P-201ENST00000384697 107 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3AO75631 HMGN2P34-201ENST00000437647 269 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.2□□□□□ -2.22
UPK3AO75631 HMGN2P26-201ENST00000463169 339 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 RPS26P45-201ENST00000471748 340 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 AL163195.1-201ENST00000496941 348 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3AO75631 RNU6-506P-201ENST00000516553 94 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 AL078596.1-201ENST00000624856 447 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
UPK3AO75631 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 Y_RNA.41-201ENST00000362646 102 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 snoU2-30.2-201ENST00000362805 70 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 SNORD50.1-201ENST00000362987 71 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 RNY3P3-201ENST00000363816 102 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 RNU6-1090P-201ENST00000364065 94 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 Y_RNA.256-201ENST00000364594 104 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 MIR586-201ENST00000385035 97 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 DLGAP5P1-201ENST00000430307 464 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 MTCO3P18-201ENST00000440206 761 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 AC073910.1-201ENST00000445047 438 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 RNU7-57P-201ENST00000459540 60 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 MTCYBP18-201ENST00000501056 747 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 AC093534.1-201ENST00000504977 132 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 MIR4709-201ENST00000577272 72 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 POLR3GP2-201ENST00000588366 668 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 AF250324.2-201ENST00000608299 610 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 MIR1321-201ENST00000637766 79 ntBASIC1.19□□□□□ -2.22
UPK3AO75631 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
UPK3AO75631 Y_RNA.164-201ENST00000363709 102 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 Y_RNA.530-201ENST00000384587 101 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 RNU6-417P-201ENST00000384712 107 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 MIR32-201ENST00000384965 70 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
UPK3AO75631 RNU6-332P-201ENST00000391193 108 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 MIR1253-201ENST00000408273 105 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3AO75631 Z82188.1-201ENST00000436709 154 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AC009474.2-201ENST00000451383 136 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3AO75631 AC079354.2-201ENST00000453523 154 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3AO75631 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 TRBVA-201ENST00000498804 316 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 MTCO2P30-201ENST00000503662 364 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 RNU6-256P-201ENST00000516747 97 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AP003033.1-201ENST00000527244 415 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.18□□□□□ -2.22
UPK3AO75631 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.18□□□□□ -2.22
UPK3AO75631 AC097065.2-201ENST00000608159 533 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AL138726.1-201ENST00000614873 333 ntBASIC1.18□□□□□ -2.22
UPK3AO75631 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.18□□□□□ -2.22
UPK3AO75631 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
UPK3AO75631 Y_RNA.238-201ENST00000364441 102 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 RNU4-24P-201ENST00000364565 139 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 SNORA4.2-201ENST00000365313 147 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 MIR517A-201ENST00000385001 87 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.17□□□□□ -2.22
UPK3AO75631 AL445305.1-201ENST00000432577 575 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK3AO75631 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.17□□□□□ -2.22
UPK3AO75631 MTND1P11-201ENST00000456661 876 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 RNU7-66P-201ENST00000459469 62 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.17□□□□□ -2.22
UPK3AO75631 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 AC006504.8-201ENST00000621046 635 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 AC008873.1-201ENST00000625051 138 ntBASIC1.17□□□□□ -2.22
UPK3AO75631 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UPK3AO75631 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 RNU4-9P-201ENST00000364951 139 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 SNORA67.2-201ENST00000384300 149 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 RNA5SP323-201ENST00000391094 133 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 RNA5SP247-201ENST00000411181 105 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 AC004965.1-201ENST00000413033 213 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK3AO75631 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK3AO75631 DAP3P1-201ENST00000441522 278 ntBASIC1.16□□□□□ -2.22
UPK3AO75631 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK3AO75631 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK3AO75631 ACA59.1-201ENST00000515966 143 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms