Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.638-201ENST00000459374 113 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.44□□□□□ -1.86
VAMP4O75379 AL137100.2-201ENST00000555786 315 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 AC027176.1-201ENST00000560204 514 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.44□□□□□ -1.86
VAMP4O75379 MIR4319-201ENST00000577285 85 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 MIR3674-201ENST00000636576 68 ntBASIC3.44□□□□□ -1.86
VAMP4O75379 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VAMP4O75379 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP4O75379 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP4O75379 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP4O75379 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.43□□□□□ -1.86
VAMP4O75379 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.43□□□□□ -1.86
VAMP4O75379 AC026241.1-201ENST00000517873 2142 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.43□□□□□ -1.86
VAMP4O75379 SNORD56.5-201ENST00000364281 72 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 Y_RNA.464-201ENST00000384282 110 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 PCNPP3-201ENST00000393579 471 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 RNU2-54P-201ENST00000410299 190 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 RNA5SP475-201ENST00000410568 110 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 RNU6-651P-201ENST00000411040 105 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.43□□□□□ -1.86
VAMP4O75379 AL139281.1-201ENST00000422120 335 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 MTND2P29-201ENST00000438595 412 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 RPL23AP3-201ENST00000453844 468 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 SNORD2.1-201ENST00000458762 69 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AC112771.1-201ENST00000463581 102 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 RPL36AP48-201ENST00000485521 314 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AP002392.1-201ENST00000537692 208 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.43□□□□□ -1.86
VAMP4O75379 AL512605.2-201ENST00000592972 256 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.43□□□□□ -1.86
VAMP4O75379 AC005562.2-201ENST00000618264 111 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AC091932.3-201ENST00000624223 323 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.43□□□□□ -1.86
VAMP4O75379 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
VAMP4O75379 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAMP4O75379 AC138915.1-201ENST00000565427 1685 ntBASIC3.43□□□□□ -1.86
VAMP4O75379 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VAMP4O75379 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VAMP4O75379 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.42□□□□□ -1.86
VAMP4O75379 RNU6-1289P-201ENST00000384431 106 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 Y_RNA.510-201ENST00000384511 114 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 RNU4-61P-201ENST00000411243 107 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 UBBP3-201ENST00000445497 241 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 AL109933.2-201ENST00000452651 260 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 AC145146.1-201ENST00000496370 254 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.42□□□□□ -1.86
VAMP4O75379 SNORD116-28-201ENST00000516123 91 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 Y_RNA.679-201ENST00000516416 91 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 RNU6-966P-201ENST00000516479 104 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.42□□□□□ -1.86
VAMP4O75379 AC024405.2-202ENST00000532731 184 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 RPL21P9-201ENST00000556149 474 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VAMP4O75379 AC069528.2-201ENST00000624849 1991 ntBASIC3.42□□□□□ -1.86
VAMP4O75379 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAMP4O75379 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
VAMP4O75379 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
VAMP4O75379 SNORA5B-201ENST00000363786 132 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 Y_RNA.217-201ENST00000364214 105 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 RNU6-1264P-201ENST00000383891 107 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 RNU6-1248P-201ENST00000391096 64 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 RNA5SP354-201ENST00000391247 136 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 AL513477.1-202ENST00000417061 214 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 AC009963.1-201ENST00000417265 157 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.41□□□□□ -1.86
VAMP4O75379 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.41□□□□□ -1.86
VAMP4O75379 Y_RNA.641-201ENST00000459414 105 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 AC107393.1-201ENST00000512403 346 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 RNA5SP76-201ENST00000516277 87 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.41□□□□□ -1.86
VAMP4O75379 RPL17P51-201ENST00000605218 238 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 SNORD11B-201ENST00000607707 90 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 AC073349.3-201ENST00000617616 186 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.41□□□□□ -1.86
VAMP4O75379 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VAMP4O75379 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.41□□□□□ -1.86
VAMP4O75379 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAMP4O75379 RNU6-727P-201ENST00000363592 107 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AC097463.2-201ENST00000421074 142 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AC063976.3-201ENST00000426849 329 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AC004386.2-201ENST00000441858 148 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AC009237.7-201ENST00000447357 229 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.4□□□□□ -1.87
VAMP4O75379 RNU6-1212P-201ENST00000517023 104 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AP002001.1-203ENST00000534002 267 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AC072026.1-201ENST00000605023 201 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 AC068205.3-201ENST00000636385 468 ntBASIC3.4□□□□□ -1.87
VAMP4O75379 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAMP4O75379 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VAMP4O75379 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VAMP4O75379 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.39□□□□□ -1.87
VAMP4O75379 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RNU6-545P-201ENST00000362681 104 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 MIR767-201ENST00000390228 109 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RNA5SP184-201ENST00000411071 108 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 AC027124.2-201ENST00000428249 105 ntBASIC3.39□□□□□ -1.87
VAMP4O75379 RN7SL297P-201ENST00000483161 293 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms