Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS4BO75351 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 HSPE1P25-201ENST00000455484 251 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 MTND1P19-201ENST00000511780 315 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 RNU6-1271P-201ENST00000517049 105 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 RNU6-570P-201ENST00000517051 105 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS4BO75351 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS4BO75351 SNORD11B-201ENST00000607707 90 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AC008873.1-201ENST00000625051 138 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS4BO75351 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS4BO75351 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VPS4BO75351 RNU6-944P-201ENST00000364023 107 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.350-201ENST00000365409 98 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.447-201ENST00000384184 113 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.541-201ENST00000384640 113 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4BO75351 UQCRBP2-201ENST00000447827 297 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 NDUFB4P10-201ENST00000452541 359 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 HSPE1P18-201ENST00000517602 280 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4BO75351 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS4BO75351 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4BO75351 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 MIR5006-201ENST00000583027 110 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 SNORD113-5-201ENST00000607261 78 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC068205.3-201ENST00000636385 468 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Z82209.1-201ENST00000422141 2135 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.415-201ENST00000384012 112 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 SNORA70B-201ENST00000384210 135 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RNU6-102P-201ENST00000384485 104 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 MIR218-1-201ENST00000384999 110 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RNU2-38P-201ENST00000410856 79 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RAB28P5-201ENST00000427490 651 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS4BO75351 RNU6-625P-201ENST00000459412 107 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 SEPT14P8-201ENST00000508026 178 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 Y_RNA.680-201ENST00000516441 93 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RNU6-794P-201ENST00000517261 64 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS4BO75351 AC055872.1-201ENST00000570978 278 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS4BO75351 AC022441.3-201ENST00000605737 136 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 MIR7843-201ENST00000622274 79 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS4BO75351 RNU4-90P-201ENST00000362773 141 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-379P-201ENST00000363813 104 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 Y_RNA.476-201ENST00000384347 108 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 Y_RNA.498-201ENST00000384460 102 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS4BO75351 AC108059.2-201ENST00000434626 151 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC090515.1-201ENST00000465295 476 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-1338P-201ENST00000516328 91 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-1098P-201ENST00000516772 96 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AP002001.1-203ENST00000534002 267 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 MIR3616-201ENST00000584070 92 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS4BO75351 AC012433.1-201ENST00000588916 398 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC005176.2-201ENST00000596933 147 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 SDR42E1P4-201ENST00000620894 481 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS4BO75351 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS4BO75351 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS4BO75351 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-727P-201ENST00000363592 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 Y_RNA.237-201ENST00000364439 102 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1175P-201ENST00000365200 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-290P-201ENST00000365212 101 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1264P-201ENST00000383891 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1310P-201ENST00000384153 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AL033519.2-201ENST00000403958 392 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 MIR1294-201ENST00000408503 142 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RPL39P38-201ENST00000467018 153 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC023141.11-201ENST00000508864 202 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1023P-201ENST00000516137 106 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS4BO75351 AL356280.1-201ENST00000603614 379 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC011373.1-201ENST00000607270 237 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AL590240.4-201ENST00000616908 390 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 MIR5739-201ENST00000619803 80 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC090517.3-201ENST00000625170 141 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS4BO75351 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS4BO75351 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
VPS4BO75351 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS4BO75351 AL391987.6-201ENST00000305671 199 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms