Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS4BO75351 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 HSPE1P25-201ENST00000455484 251 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 MTND1P19-201ENST00000511780 315 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 RNU6-1271P-201ENST00000517049 105 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 RNU6-570P-201ENST00000517051 105 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS4BO75351 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS4BO75351 SNORD11B-201ENST00000607707 90 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AC008873.1-201ENST00000625051 138 ntBASIC2.73□□□□□ -1.97
VPS4BO75351 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS4BO75351 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS4BO75351 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VPS4BO75351 RNU6-944P-201ENST00000364023 107 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.350-201ENST00000365409 98 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.447-201ENST00000384184 113 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.541-201ENST00000384640 113 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4BO75351 UQCRBP2-201ENST00000447827 297 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 NDUFB4P10-201ENST00000452541 359 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 HSPE1P18-201ENST00000517602 280 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4BO75351 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS4BO75351 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4BO75351 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 MIR5006-201ENST00000583027 110 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 SNORD113-5-201ENST00000607261 78 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 AC068205.3-201ENST00000636385 468 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Z82209.1-201ENST00000422141 2135 ntBASIC2.72□□□□□ -1.97
VPS4BO75351 Y_RNA.415-201ENST00000384012 112 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 SNORA70B-201ENST00000384210 135 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RNU6-102P-201ENST00000384485 104 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 MIR218-1-201ENST00000384999 110 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RNU2-38P-201ENST00000410856 79 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RAB28P5-201ENST00000427490 651 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS4BO75351 RNU6-625P-201ENST00000459412 107 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 SEPT14P8-201ENST00000508026 178 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 Y_RNA.680-201ENST00000516441 93 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 RNU6-794P-201ENST00000517261 64 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS4BO75351 AC055872.1-201ENST00000570978 278 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS4BO75351 AC022441.3-201ENST00000605737 136 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 MIR7843-201ENST00000622274 79 ntBASIC2.71□□□□□ -1.98
VPS4BO75351 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS4BO75351 RNU4-90P-201ENST00000362773 141 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-379P-201ENST00000363813 104 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 Y_RNA.476-201ENST00000384347 108 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 Y_RNA.498-201ENST00000384460 102 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS4BO75351 AC108059.2-201ENST00000434626 151 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC090515.1-201ENST00000465295 476 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-1338P-201ENST00000516328 91 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-1098P-201ENST00000516772 96 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 RNU6-826P-201ENST00000516827 104 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AP002001.1-203ENST00000534002 267 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 MIR3616-201ENST00000584070 92 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS4BO75351 AC012433.1-201ENST00000588916 398 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 AC005176.2-201ENST00000596933 147 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 SDR42E1P4-201ENST00000620894 481 ntBASIC2.7□□□□□ -1.98
VPS4BO75351 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS4BO75351 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS4BO75351 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS4BO75351 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-727P-201ENST00000363592 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 Y_RNA.237-201ENST00000364439 102 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1175P-201ENST00000365200 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-290P-201ENST00000365212 101 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1264P-201ENST00000383891 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1310P-201ENST00000384153 107 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AL033519.2-201ENST00000403958 392 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 MIR1294-201ENST00000408503 142 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RPL39P38-201ENST00000467018 153 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC023141.11-201ENST00000508864 202 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 RNU6-1023P-201ENST00000516137 106 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS4BO75351 AL356280.1-201ENST00000603614 379 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC011373.1-201ENST00000607270 237 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AL590240.4-201ENST00000616908 390 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 MIR5739-201ENST00000619803 80 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AC090517.3-201ENST00000625170 141 ntBASIC2.69□□□□□ -1.98
VPS4BO75351 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS4BO75351 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS4BO75351 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
VPS4BO75351 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS4BO75351 AL391987.6-201ENST00000305671 199 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms