Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 AC017071.1-201ENST00000564407 2204 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 RNU1-75P-201ENST00000347264 129 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 RNU6-763P-201ENST00000390865 106 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 RNU6-578P-201ENST00000390980 103 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 RNA5SP504-201ENST00000410676 117 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 AL135790.2-201ENST00000437701 267 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.09□□□□□ -1.75
PTCD1O75127 AC092991.1-201ENST00000477176 376 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 RAC1P5-201ENST00000512182 576 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 AC079598.5-201ENST00000547460 117 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 AC006254.2-201ENST00000603259 279 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 AC069294.1-201ENST00000608397 350 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 uc_338.25-201ENST00000613756 156 ntBASIC4.09□□□□□ -1.75
PTCD1O75127 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTCD1O75127 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD1O75127 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD1O75127 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD1O75127 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTCD1O75127 RNA5SP295-201ENST00000362655 121 ntBASIC4.08□□□□□ -1.76
PTCD1O75127 RNU1-105P-201ENST00000363470 161 ntBASIC4.08□□□□□ -1.76
PTCD1O75127 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PTCD1O75127 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCD1O75127 AL031121.1-201ENST00000406553 254 ntBASIC4.08□□□□□ -1.76
PTCD1O75127 AL365496.1-201ENST00000426885 215 ntBASIC4.08□□□□□ -1.76
PTCD1O75127 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.08□□□□□ -1.76
PTCD1O75127 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.08□□□□□ -1.76
PTCD1O75127 RNU6-844P-201ENST00000517175 102 ntBASIC4.08□□□□□ -1.76
PTCD1O75127 AC011603.4-201ENST00000611325 277 ntBASIC4.08□□□□□ -1.76
PTCD1O75127 AL136164.4-201ENST00000625013 2135 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 SNORA22-201ENST00000383907 134 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 AL031003.1-201ENST00000404229 172 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 AC074290.1-201ENST00000448883 135 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 RPS20P10-201ENST00000451209 253 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 AC107027.2-201ENST00000512197 115 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 SCARNA8-201ENST00000515924 131 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 RNU6-589P-201ENST00000516485 107 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 MIR4744-201ENST00000581563 82 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.07□□□□□ -1.76
PTCD1O75127 AC006023.1-201ENST00000603944 259 ntBASIC4.07□□□□□ -1.76
PTCD1O75127 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTCD1O75127 AC093908.1-201ENST00000623125 8092 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCD1O75127 RNU6-1144P-201ENST00000384247 104 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 RNA5SP354-201ENST00000391247 136 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 RPL23AP62-201ENST00000463396 453 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 CENPBD1P1-201ENST00000464061 469 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.06□□□□□ -1.76
PTCD1O75127 RNA5SP76-201ENST00000516277 87 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 RNU6-453P-201ENST00000516819 85 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 AC021269.2-201ENST00000532318 330 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 MIR4672-201ENST00000583126 81 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCD1O75127 AC090517.3-201ENST00000625170 141 ntBASIC4.06□□□□□ -1.76
PTCD1O75127 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCD1O75127 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTCD1O75127 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.06□□□□□ -1.76
PTCD1O75127 ZNF702P-202ENST00000434269 1966 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCD1O75127 MIR30E-201ENST00000362104 92 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 SNORD115-30-201ENST00000364117 82 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 SNORA71.1-201ENST00000364523 117 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 RN7SKP220-201ENST00000410611 288 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 AC097463.2-201ENST00000421074 142 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 TOMM22P2-201ENST00000430735 237 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 RPL23AP58-201ENST00000440453 469 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 HMGN2P7-201ENST00000456186 273 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCD1O75127 AC023043.3-201ENST00000593113 385 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 TUG1_4.1-201ENST00000619464 181 ntBASIC4.05□□□□□ -1.76
PTCD1O75127 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTCD1O75127 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD1O75127 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PTCD1O75127 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD1O75127 RNU6-199P-201ENST00000362954 107 ntBASIC4.04□□□□□ -1.76
PTCD1O75127 Y_RNA.294-201ENST00000364916 102 ntBASIC4.04□□□□□ -1.76
PTCD1O75127 SNORD67-201ENST00000390833 111 ntBASIC4.04□□□□□ -1.76
PTCD1O75127 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCD1O75127 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCD1O75127 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PTCD1O75127 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCD1O75127 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.04□□□□□ -1.76
PTCD1O75127 MIR4765-201ENST00000585007 77 ntBASIC4.04□□□□□ -1.76
PTCD1O75127 AC008739.2-201ENST00000597006 317 ntBASIC4.04□□□□□ -1.76
PTCD1O75127 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD1O75127 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD1O75127 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCD1O75127 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCD1O75127 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCD1O75127 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCD1O75127 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTCD1O75127 RNU6-801P-201ENST00000364087 105 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 SNORD15B-201ENST00000384714 146 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 SNORA26.5-201ENST00000391215 123 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.03□□□□□ -1.76
PTCD1O75127 CST9LP2-201ENST00000437612 320 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 RNU6-168P-201ENST00000516189 101 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 RNU6-711P-201ENST00000517255 106 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 AC109810.1-201ENST00000534066 224 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 RPL30P11-203ENST00000598995 310 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms