Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SNORD31B-201ENST00000364977 69 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 snosnR66.1-201ENST00000391095 99 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 MIR548F4-201ENST00000408515 105 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 ELOCP21-201ENST00000412558 336 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 RPS12P2-201ENST00000439728 269 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 AC073910.1-201ENST00000445047 438 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
ZIC3O60481 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.17□□□□□ -2.06
ZIC3O60481 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZIC3O60481 SNORA25.6-201ENST00000364121 118 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 SNORD87-201ENST00000364849 89 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 Y_RNA.459-201ENST00000384251 102 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 MIR586-201ENST00000385035 97 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 MIR300-201ENST00000401138 83 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AL079342.1-201ENST00000401460 267 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AL358176.2-201ENST00000425769 204 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.16□□□□□ -2.06
ZIC3O60481 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
ZIC3O60481 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.16□□□□□ -2.06
ZIC3O60481 AC131281.1-201ENST00000522984 164 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AC021269.2-201ENST00000532318 330 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AC018448.1-201ENST00000552843 316 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AC103810.6-201ENST00000606708 136 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.16□□□□□ -2.06
ZIC3O60481 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 FO624990.1-201ENST00000636373 85 ntBASIC2.16□□□□□ -2.06
ZIC3O60481 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
ZIC3O60481 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.06
ZIC3O60481 MIR21-201ENST00000362134 72 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 RNU6-961P-201ENST00000363893 105 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 RNU6-743P-201ENST00000364151 106 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 Y_RNA.276-201ENST00000364732 109 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ZIC3O60481 MIR1283-1-201ENST00000408494 87 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 DPH3P2-201ENST00000422618 250 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 UQCRBP2-201ENST00000447827 297 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 AC016925.1-201ENST00000458303 298 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 MTATP8P1-201ENST00000467115 207 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 HMGN2P9-201ENST00000476875 229 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 RNU1-117P-201ENST00000517041 158 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 RNU6-897P-201ENST00000517135 105 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 RNA5SP490-201ENST00000517141 136 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC3O60481 AL117187.1-201ENST00000555482 181 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC3O60481 MIR5194-201ENST00000582634 120 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 MIR4658-201ENST00000584344 65 ntBASIC2.15□□□□□ -2.07
ZIC3O60481 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZIC3O60481 RNA5SP393-201ENST00000363423 117 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 Y_RNA.210-201ENST00000364161 110 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 Y_RNA.214-201ENST00000364201 112 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 RNU6-1305P-201ENST00000364353 104 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 Y_RNA.332-201ENST00000365271 113 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 Y_RNA.439-201ENST00000384119 94 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 RNU6-1026P-201ENST00000384465 108 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 RNU6-1105P-201ENST00000384774 107 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 RPL21P1-201ENST00000399532 476 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 AL357139.1-201ENST00000407792 426 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.14□□□□□ -2.07
ZIC3O60481 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.14□□□□□ -2.07
ZIC3O60481 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.14□□□□□ -2.07
ZIC3O60481 ELOCP20-201ENST00000422460 345 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC3O60481 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC3O60481 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.14□□□□□ -2.07
ZIC3O60481 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 NDUFB4P10-201ENST00000452541 359 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 MRPS35P2-201ENST00000508242 191 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 AC093259.1-201ENST00000509755 300 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 RNU6-408P-201ENST00000515910 100 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 RNU6-397P-201ENST00000516226 104 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 Y_RNA.713-201ENST00000517013 96 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 Y_RNA.772-201ENST00000606692 102 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 AC010297.1-201ENST00000623948 149 ntBASIC2.14□□□□□ -2.07
ZIC3O60481 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
ZIC3O60481 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZIC3O60481 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.13□□□□□ -2.07
ZIC3O60481 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZIC3O60481 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZIC3O60481 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
ZIC3O60481 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZIC3O60481 MIR410-201ENST00000362222 80 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 Y_RNA.133-201ENST00000363428 110 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 U3.8-201ENST00000363675 217 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 Y_RNA.183-201ENST00000363882 113 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 RNA5SP126-201ENST00000365092 109 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 DEFA7P-201ENST00000382676 285 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 RNU1-138P-201ENST00000384093 164 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 MIR548B-201ENST00000385247 97 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.13□□□□□ -2.07
ZIC3O60481 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 RNU6-625P-201ENST00000459412 107 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 HMGN1P10-201ENST00000474557 553 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms