Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.69□□□□□ -1.82
GRIN3BO60391 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GRIN3BO60391 RNU4-15P-201ENST00000362613 141 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 RNA5SP205-201ENST00000364653 136 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 SNORA67.4-201ENST00000384688 142 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 MIR186-201ENST00000384988 86 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 Y_RNA.597-201ENST00000410463 100 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 RPL23AP3-201ENST00000453844 468 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.69□□□□□ -1.82
GRIN3BO60391 RNU6-344P-201ENST00000516635 111 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 AC079598.5-201ENST00000547460 117 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 TGIF1P1-201ENST00000558095 802 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.69□□□□□ -1.82
GRIN3BO60391 AC007496.3-201ENST00000624987 3443 ntBASIC3.69□□□□□ -1.82
GRIN3BO60391 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GRIN3BO60391 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
GRIN3BO60391 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.69□□□□□ -1.82
GRIN3BO60391 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GRIN3BO60391 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
GRIN3BO60391 RNU6-655P-201ENST00000362858 107 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 Y_RNA.261-201ENST00000364631 102 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 Y_RNA.441-201ENST00000384123 112 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 RNU1-57P-201ENST00000384491 166 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 RNU6-417P-201ENST00000384712 107 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 Y_RNA.568-201ENST00000384742 113 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 MIR549A-201ENST00000385268 96 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 SNORA3.2-201ENST00000408221 125 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AL591806.2-201ENST00000433122 173 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.68□□□□□ -1.82
GRIN3BO60391 AP001324.2-201ENST00000461163 319 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AL121594.1-201ENST00000475906 575 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 RPS29P21-201ENST00000496272 170 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 IGKV3-31-201ENST00000523109 329 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.68□□□□□ -1.82
GRIN3BO60391 AC027176.1-201ENST00000560204 514 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AC108706.1-201ENST00000611053 297 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AC004467.1-201ENST00000615678 330 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 U7.8-201ENST00000619968 63 ntBASIC3.68□□□□□ -1.82
GRIN3BO60391 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.68□□□□□ -1.82
GRIN3BO60391 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GRIN3BO60391 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.68□□□□□ -1.82
GRIN3BO60391 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.67□□□□□ -1.82
GRIN3BO60391 AC026241.1-201ENST00000517873 2142 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 Y_RNA.43-201ENST00000362670 111 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 Y_RNA.101-201ENST00000363154 102 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 U3.9-201ENST00000363823 204 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 RNA5SP68-201ENST00000363885 119 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 RNU6-818P-201ENST00000364837 108 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GRIN3BO60391 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.67□□□□□ -1.82
GRIN3BO60391 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 Y_RNA.679-201ENST00000516416 91 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.67□□□□□ -1.82
GRIN3BO60391 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.67□□□□□ -1.82
GRIN3BO60391 RPL21P9-201ENST00000556149 474 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 AC024614.2-201ENST00000577584 372 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 MIR3674-201ENST00000636576 68 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 AC135776.4-201ENST00000624300 1904 ntBASIC3.67□□□□□ -1.82
GRIN3BO60391 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GRIN3BO60391 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.67□□□□□ -1.82
GRIN3BO60391 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GRIN3BO60391 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GRIN3BO60391 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.66□□□□□ -1.82
GRIN3BO60391 AC080128.1-201ENST00000474389 1917 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.66□□□□□ -1.82
GRIN3BO60391 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
GRIN3BO60391 RNU6-859P-201ENST00000362728 107 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 Y_RNA.217-201ENST00000364214 105 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AP002088.1-201ENST00000382740 395 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 RNU6-1289P-201ENST00000384431 106 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 Y_RNA.497-201ENST00000384447 98 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 RNU2-54P-201ENST00000410299 190 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 RNU6-1199P-201ENST00000411249 104 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AL162725.1-201ENST00000435405 301 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 CST9LP2-201ENST00000437612 320 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 Y_RNA.641-201ENST00000459414 105 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AC091179.1-201ENST00000461606 579 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 RNU6-919P-201ENST00000516731 104 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.66□□□□□ -1.82
GRIN3BO60391 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.66□□□□□ -1.82
GRIN3BO60391 MIR4308-201ENST00000580634 81 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.66□□□□□ -1.82
GRIN3BO60391 TCL6_2.1-201ENST00000615162 119 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AC005562.2-201ENST00000618264 111 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 AC091932.3-201ENST00000624223 323 ntBASIC3.66□□□□□ -1.82
GRIN3BO60391 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
GRIN3BO60391 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GRIN3BO60391 AC100821.1-201ENST00000523153 2479 ntBASIC3.65□□□□□ -1.82
GRIN3BO60391 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
GRIN3BO60391 RNU1-105P-201ENST00000363470 161 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 Y_RNA.273-201ENST00000364703 102 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 RNU6-1264P-201ENST00000383891 107 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms