Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 TAF9P1-201ENST00000445421 515 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 SNRPGP12-201ENST00000449481 213 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 TAF9P2-201ENST00000454958 515 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 RNU2-69P-201ENST00000516061 100 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 RNU6-344P-201ENST00000516635 111 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 RNU6-430P-201ENST00000517078 107 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.04□□□□□ -2.42
HMGB3O15347 AP003327.1-201ENST00000529684 127 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 MTCO3P23-201ENST00000561363 289 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 EIF1P4-201ENST00000572664 335 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 MIR4452-201ENST00000583004 71 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 MIR6504-201ENST00000613520 61 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.04□□□□□ -2.42
HMGB3O15347 AC139792.3-201ENST00000623525 224 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 MIR6079-201ENST00000635807 62 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 AC013437.2-201ENST00000639587 677 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 MIRLET7C-201ENST00000362160 84 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 SNORA20.2-201ENST00000383922 131 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 RNU6-434P-201ENST00000384376 107 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 MIR526A1-201ENST00000384897 85 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 RNA5SP511-201ENST00000410487 115 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.05□□□□□ -2.42
HMGB3O15347 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.05□□□□□ -2.42
HMGB3O15347 USP9YP25-201ENST00000457708 443 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 AC090572.1-201ENST00000519251 160 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 AL162730.1-201ENST00000605734 292 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 AC009878.1-201ENST00000621819 340 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 MIR4315-1-201ENST00000636800 73 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 MIR4315-2-201ENST00000640925 73 ntBASIC-0.05□□□□□ -2.42
HMGB3O15347 RNA5SP62-201ENST00000363457 110 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 AL355143.1-201ENST00000407101 841 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 RNA5SP494-201ENST00000410653 129 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 MTCO2P34-201ENST00000421994 607 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 AL596276.1-201ENST00000434465 418 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGB3O15347 MTCO2P3-201ENST00000442543 421 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGB3O15347 FRG2DP-202ENST00000566967 323 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 MIR4775-201ENST00000581168 75 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.06□□□□□ -2.42
HMGB3O15347 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 AL607023.1-201ENST00000620045 248 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 AC121333.1-201ENST00000567488 2709 ntBASIC-0.06□□□□□ -2.42
HMGB3O15347 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
HMGB3O15347 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 RNU6-266P-201ENST00000364225 107 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 MTCO3P10-201ENST00000455912 772 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 MTND1P22-201ENST00000510572 951 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.07□□□□□ -2.42
HMGB3O15347 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
HMGB3O15347 AC005771.1-201ENST00000585581 349 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 BNIP3P39-201ENST00000601077 554 ntBASIC-0.07□□□□□ -2.42
HMGB3O15347 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HMGB3O15347 SNORD70.1-201ENST00000391007 85 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 MIR1185-2-201ENST00000408687 86 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 RNU6-994P-201ENST00000410507 111 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 RNU4-46P-201ENST00000410818 138 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.08□□□□□ -2.42
HMGB3O15347 AL603825.1-201ENST00000438481 80 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.08□□□□□ -2.42
HMGB3O15347 RPS29P27-201ENST00000463711 170 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.08□□□□□ -2.42
HMGB3O15347 RN7SKP164-201ENST00000516138 266 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 RNA5SP454-201ENST00000517231 127 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AP001372.4-201ENST00000524889 472 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AP003168.1-201ENST00000530091 307 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AC022523.2-201ENST00000561045 150 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AGGF1P4-201ENST00000568249 801 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AC090517.2-201ENST00000614966 680 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AC078938.1-201ENST00000620993 318 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.08□□□□□ -2.42
HMGB3O15347 OR5AK4P-201ENST00000635912 903 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AC099654.13-201ENST00000639774 207 ntBASIC-0.08□□□□□ -2.42
HMGB3O15347 AC005592.1-201ENST00000566527 1640 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 MIR573-201ENST00000384964 99 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 MIR454-201ENST00000390180 115 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGB3O15347 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGB3O15347 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.09□□□□□ -2.42
HMGB3O15347 EPS15P1-201ENST00000448836 336 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.09□□□□□ -2.42
HMGB3O15347 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.09□□□□□ -2.42
HMGB3O15347 CYCTP-201ENST00000504253 315 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC069113.1-201ENST00000517763 267 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC027288.2-201ENST00000553028 243 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC104695.3-201ENST00000604052 296 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC069431.2-201ENST00000604149 1099 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC015726.2-201ENST00000620112 122 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 AC092634.7-201ENST00000621022 103 ntBASIC-0.09□□□□□ -2.42
HMGB3O15347 SCARNA4-201ENST00000629045 128 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms