Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC007215.1-201ENST00000464893 276 ntBASIC0.57□□□□□ -2.32
CHD2O14647 RNU6-311P-201ENST00000516224 102 ntBASIC0.57□□□□□ -2.32
CHD2O14647 RNU6-1198P-201ENST00000516904 67 ntBASIC0.57□□□□□ -2.32
CHD2O14647 SNORA59B-202ENST00000578183 701 ntBASIC0.57□□□□□ -2.32
CHD2O14647 MIR4742-201ENST00000581069 85 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AC006566.1-201ENST00000608943 513 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AC040896.1-201ENST00000613819 479 ntBASIC0.57□□□□□ -2.32
CHD2O14647 RNU6-1093P-201ENST00000391194 107 ntBASIC0.57□□□□□ -2.32
CHD2O14647 RNA5SP299-201ENST00000391203 116 ntBASIC0.57□□□□□ -2.32
CHD2O14647 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
CHD2O14647 MIR320B2-201ENST00000408479 138 ntBASIC0.57□□□□□ -2.32
CHD2O14647 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.57□□□□□ -2.32
CHD2O14647 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.57□□□□□ -2.32
CHD2O14647 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD2O14647 MTCO2P7-201ENST00000446518 666 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AC016717.1-201ENST00000448918 286 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AL031274.1-201ENST00000450334 232 ntBASIC0.57□□□□□ -2.32
CHD2O14647 C1DP4-201ENST00000455429 424 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD2O14647 SNORD11.1-201ENST00000459482 85 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.57□□□□□ -2.32
CHD2O14647 AC146944.4-201ENST00000602697 718 ntBASIC0.57□□□□□ -2.32
CHD2O14647 AC004492.1-201ENST00000607036 742 ntBASIC0.57□□□□□ -2.32
CHD2O14647 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.57□□□□□ -2.32
CHD2O14647 AP001506.1-201ENST00000615444 211 ntBASIC0.57□□□□□ -2.32
CHD2O14647 snoZ196.1-201ENST00000625269 89 ntBASIC0.57□□□□□ -2.32
CHD2O14647 RNU6-82P-201ENST00000363970 107 ntBASIC0.56□□□□□ -2.32
CHD2O14647 Y_RNA.280-201ENST00000364765 112 ntBASIC0.56□□□□□ -2.32
CHD2O14647 SNORA67.2-201ENST00000384300 149 ntBASIC0.56□□□□□ -2.32
CHD2O14647 RNU6-440P-201ENST00000390882 105 ntBASIC0.56□□□□□ -2.32
CHD2O14647 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
CHD2O14647 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.56□□□□□ -2.32
CHD2O14647 AC245047.3-201ENST00000429428 127 ntBASIC0.56□□□□□ -2.32
CHD2O14647 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.56□□□□□ -2.32
CHD2O14647 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.56□□□□□ -2.32
CHD2O14647 MTCO3P18-201ENST00000440206 761 ntBASIC0.56□□□□□ -2.32
CHD2O14647 NFU1P2-201ENST00000448700 469 ntBASIC0.56□□□□□ -2.32
CHD2O14647 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CHD2O14647 AC010493.1-201ENST00000513479 292 ntBASIC0.56□□□□□ -2.32
CHD2O14647 AP002001.1-203ENST00000534002 267 ntBASIC0.56□□□□□ -2.32
CHD2O14647 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.56□□□□□ -2.32
CHD2O14647 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.56□□□□□ -2.32
CHD2O14647 BNIP3P39-201ENST00000601077 554 ntBASIC0.56□□□□□ -2.32
CHD2O14647 AL390123.1-201ENST00000603216 237 ntBASIC0.56□□□□□ -2.32
CHD2O14647 AL513423.1-201ENST00000621695 132 ntBASIC0.56□□□□□ -2.32
CHD2O14647 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CHD2O14647 RNU6-715P-201ENST00000365204 103 ntBASIC0.55□□□□□ -2.32
CHD2O14647 RNU6-331P-201ENST00000384724 107 ntBASIC0.55□□□□□ -2.32
CHD2O14647 RNU2-64P-201ENST00000411315 191 ntBASIC0.55□□□□□ -2.32
CHD2O14647 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.55□□□□□ -2.32
CHD2O14647 LINC01399-202ENST00000458450 244 ntBASIC0.55□□□□□ -2.32
CHD2O14647 MTCO3P38-201ENST00000468910 766 ntBASIC0.55□□□□□ -2.32
CHD2O14647 AL163973.1-201ENST00000484753 577 ntBASIC0.55□□□□□ -2.32
CHD2O14647 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.55□□□□□ -2.32
CHD2O14647 RNU6-947P-201ENST00000516264 106 ntBASIC0.55□□□□□ -2.32
CHD2O14647 RNU6-344P-201ENST00000516635 111 ntBASIC0.55□□□□□ -2.32
CHD2O14647 AL590705.4-201ENST00000532209 134 ntBASIC0.55□□□□□ -2.32
CHD2O14647 7SK.7-201ENST00000603504 247 ntBASIC0.55□□□□□ -2.32
CHD2O14647 AC002044.1-201ENST00000606707 158 ntBASIC0.55□□□□□ -2.32
CHD2O14647 AL359075.3-201ENST00000613288 217 ntBASIC0.55□□□□□ -2.32
CHD2O14647 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CHD2O14647 RNU6-266P-201ENST00000364225 107 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-74P-201ENST00000384235 107 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-456P-201ENST00000384493 107 ntBASIC0.54□□□□□ -2.32
CHD2O14647 SNORA40.3-201ENST00000390964 122 ntBASIC0.54□□□□□ -2.32
CHD2O14647 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
CHD2O14647 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.54□□□□□ -2.32
CHD2O14647 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.54□□□□□ -2.32
CHD2O14647 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.54□□□□□ -2.32
CHD2O14647 MTATP6P9-201ENST00000515039 680 ntBASIC0.54□□□□□ -2.32
CHD2O14647 MRPS36P3-201ENST00000519284 130 ntBASIC0.54□□□□□ -2.32
CHD2O14647 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.54□□□□□ -2.32
CHD2O14647 AF246928.1-201ENST00000623768 87 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-227P-201ENST00000362865 103 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-199P-201ENST00000362954 107 ntBASIC0.54□□□□□ -2.32
CHD2O14647 Y_RNA.159-201ENST00000363674 87 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-1286P-201ENST00000383871 107 ntBASIC0.54□□□□□ -2.32
CHD2O14647 Y_RNA.399-201ENST00000383955 105 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-925P-201ENST00000384629 104 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-606P-201ENST00000384721 111 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-1031P-201ENST00000384773 107 ntBASIC0.54□□□□□ -2.32
CHD2O14647 AL451046.2-201ENST00000403074 277 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU6-1186P-201ENST00000410429 97 ntBASIC0.54□□□□□ -2.32
CHD2O14647 AC022364.2-201ENST00000457963 554 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU2-69P-201ENST00000516061 100 ntBASIC0.54□□□□□ -2.32
CHD2O14647 SNORD27.1-201ENST00000516319 72 ntBASIC0.54□□□□□ -2.32
CHD2O14647 AC109810.1-201ENST00000534066 224 ntBASIC0.54□□□□□ -2.32
CHD2O14647 AC022217.4-201ENST00000604389 163 ntBASIC0.54□□□□□ -2.32
CHD2O14647 AC091304.9-201ENST00000612091 226 ntBASIC0.54□□□□□ -2.32
CHD2O14647 MIR6718-201ENST00000616153 80 ntBASIC0.54□□□□□ -2.32
CHD2O14647 SNORA43.4-201ENST00000629559 138 ntBASIC0.54□□□□□ -2.32
CHD2O14647 RNU4-67P-201ENST00000364569 141 ntBASIC0.53□□□□□ -2.32
CHD2O14647 SNORA80D-201ENST00000384488 135 ntBASIC0.53□□□□□ -2.32
CHD2O14647 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
CHD2O14647 SNORA16.2-201ENST00000390991 127 ntBASIC0.53□□□□□ -2.32
CHD2O14647 MIR891A-201ENST00000401237 79 ntBASIC0.53□□□□□ -2.32
CHD2O14647 SNORD99-201ENST00000408612 74 ntBASIC0.53□□□□□ -2.32
CHD2O14647 RPS26P42-201ENST00000413485 326 ntBASIC0.53□□□□□ -2.32
CHD2O14647 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.53□□□□□ -2.32
CHD2O14647 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms