Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.787-201ENST00000616522 101 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.780-201ENST00000617336 101 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.801-201ENST00000619005 101 ntBASIC1.75□□□□□ -2.13
CDX4O14627 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.112-201ENST00000363250 102 ntBASIC1.74□□□□□ -2.13
CDX4O14627 RNU1-23P-201ENST00000363361 144 ntBASIC1.74□□□□□ -2.13
CDX4O14627 RNU6-595P-201ENST00000363944 107 ntBASIC1.74□□□□□ -2.13
CDX4O14627 Y_RNA.224-201ENST00000364308 111 ntBASIC1.74□□□□□ -2.13
CDX4O14627 RNA5SP160-201ENST00000364866 120 ntBASIC1.74□□□□□ -2.13
CDX4O14627 SNORA36A-201ENST00000384221 132 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AL590004.1-201ENST00000405321 300 ntBASIC1.74□□□□□ -2.13
CDX4O14627 Y_RNA.597-201ENST00000410463 100 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.74□□□□□ -2.13
CDX4O14627 AC018865.2-201ENST00000423631 129 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AL160004.2-201ENST00000432935 350 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.74□□□□□ -2.13
CDX4O14627 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.74□□□□□ -2.13
CDX4O14627 AC105758.1-201ENST00000506038 399 ntBASIC1.74□□□□□ -2.13
CDX4O14627 RNU6-976P-201ENST00000516086 111 ntBASIC1.74□□□□□ -2.13
CDX4O14627 SNORA31.25-201ENST00000517242 134 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.74□□□□□ -2.13
CDX4O14627 AL442663.2-201ENST00000554385 511 ntBASIC1.74□□□□□ -2.13
CDX4O14627 SNORA4-201ENST00000584302 138 ntBASIC1.74□□□□□ -2.13
CDX4O14627 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AC040896.1-201ENST00000613819 479 ntBASIC1.74□□□□□ -2.13
CDX4O14627 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AC007485.1-201ENST00000616755 206 ntBASIC1.74□□□□□ -2.13
CDX4O14627 SNORA43.4-201ENST00000629559 138 ntBASIC1.74□□□□□ -2.13
CDX4O14627 AC005336.3-201ENST00000623833 2679 ntBASIC1.74□□□□□ -2.13
CDX4O14627 ZNF299P-201ENST00000406845 1804 ntBASIC1.74□□□□□ -2.13
CDX4O14627 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDX4O14627 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDX4O14627 Y_RNA.28-201ENST00000362554 111 ntBASIC1.73□□□□□ -2.13
CDX4O14627 RNY3P11-201ENST00000364153 102 ntBASIC1.73□□□□□ -2.13
CDX4O14627 Y_RNA.252-201ENST00000364556 101 ntBASIC1.73□□□□□ -2.13
CDX4O14627 RNU6-611P-201ENST00000384276 104 ntBASIC1.73□□□□□ -2.13
CDX4O14627 RNY1P14-201ENST00000384426 108 ntBASIC1.73□□□□□ -2.13
CDX4O14627 SNORA40.19-201ENST00000390846 128 ntBASIC1.73□□□□□ -2.13
CDX4O14627 RNA5SP494-201ENST00000410653 129 ntBASIC1.73□□□□□ -2.13
CDX4O14627 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
CDX4O14627 MTCO3P29-201ENST00000432119 779 ntBASIC1.73□□□□□ -2.13
CDX4O14627 Z82188.1-201ENST00000436709 154 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AL035666.1-201ENST00000446195 348 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC245102.2-201ENST00000448956 180 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC055731.1-201ENST00000474387 401 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.73□□□□□ -2.13
CDX4O14627 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.73□□□□□ -2.13
CDX4O14627 RN7SKP295-201ENST00000517264 153 ntBASIC1.73□□□□□ -2.13
CDX4O14627 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.73□□□□□ -2.13
CDX4O14627 NDUFA5P6-201ENST00000542110 379 ntBASIC1.73□□□□□ -2.13
CDX4O14627 CYP4A27P-201ENST00000567218 190 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC007229.1-201ENST00000590455 412 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC078899.2-201ENST00000595282 212 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC006157.1-201ENST00000611750 366 ntBASIC1.73□□□□□ -2.13
CDX4O14627 MIR1244-1-201ENST00000612829 85 ntBASIC1.73□□□□□ -2.13
CDX4O14627 MIR1244-3-201ENST00000635744 85 ntBASIC1.73□□□□□ -2.13
CDX4O14627 MIR1244-2-201ENST00000636449 85 ntBASIC1.73□□□□□ -2.13
CDX4O14627 MIR1244-4-202ENST00000636813 85 ntBASIC1.73□□□□□ -2.13
CDX4O14627 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.73□□□□□ -2.13
CDX4O14627 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
CDX4O14627 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
CDX4O14627 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CDX4O14627 MTND4P1-201ENST00000457501 1466 ntBASIC1.72□□□□□ -2.13
CDX4O14627 Y_RNA.80-201ENST00000362996 102 ntBASIC1.72□□□□□ -2.13
CDX4O14627 Y_RNA.148-201ENST00000363557 117 ntBASIC1.72□□□□□ -2.13
CDX4O14627 Y_RNA.202-201ENST00000364083 110 ntBASIC1.72□□□□□ -2.13
CDX4O14627 RNU6-968P-201ENST00000384076 107 ntBASIC1.72□□□□□ -2.13
CDX4O14627 Y_RNA.428-201ENST00000384078 102 ntBASIC1.72□□□□□ -2.13
CDX4O14627 SNORA29-201ENST00000384183 140 ntBASIC1.72□□□□□ -2.13
CDX4O14627 Y_RNA.485-201ENST00000384395 102 ntBASIC1.72□□□□□ -2.13
CDX4O14627 MIR17-201ENST00000385012 84 ntBASIC1.72□□□□□ -2.13
CDX4O14627 U3.40-201ENST00000408706 208 ntBASIC1.72□□□□□ -2.13
CDX4O14627 RNU6-1156P-201ENST00000410365 100 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AC096644.2-201ENST00000429278 159 ntBASIC1.72□□□□□ -2.13
CDX4O14627 MTND4P19-201ENST00000446659 478 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AL021397.1-201ENST00000451806 248 ntBASIC1.72□□□□□ -2.13
CDX4O14627 RPL23AP75-201ENST00000491601 451 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AC145146.1-201ENST00000496370 254 ntBASIC1.72□□□□□ -2.13
CDX4O14627 SNORA4.4-201ENST00000515921 135 ntBASIC1.72□□□□□ -2.13
CDX4O14627 RNA5SP137-201ENST00000516833 135 ntBASIC1.72□□□□□ -2.13
CDX4O14627 SNORD116.3-201ENST00000517176 78 ntBASIC1.72□□□□□ -2.13
CDX4O14627 RNU6-667P-201ENST00000517186 102 ntBASIC1.72□□□□□ -2.13
CDX4O14627 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.72□□□□□ -2.13
CDX4O14627 MIR5701-3-201ENST00000578890 82 ntBASIC1.72□□□□□ -2.13
CDX4O14627 MIR5701-1-201ENST00000585138 82 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AC010928.2-201ENST00000588017 287 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AC092447.9-201ENST00000603395 144 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AC016925.2-201ENST00000605108 242 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AC022202.1-201ENST00000613515 211 ntBASIC1.72□□□□□ -2.13
CDX4O14627 MIR5701-2-201ENST00000615634 82 ntBASIC1.72□□□□□ -2.13
CDX4O14627 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.72□□□□□ -2.13
CDX4O14627 AC091925.1-201ENST00000623204 462 ntBASIC1.72□□□□□ -2.13
CDX4O14627 AL450472.1-202ENST00000637286 180 ntBASIC1.72□□□□□ -2.13
CDX4O14627 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CDX4O14627 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CDX4O14627 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CDX4O14627 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.71□□□□□ -2.14
CDX4O14627 RNU6-874P-201ENST00000362390 105 ntBASIC1.71□□□□□ -2.14
CDX4O14627 RNU4-15P-201ENST00000362613 141 ntBASIC1.71□□□□□ -2.14
CDX4O14627 U3.9-201ENST00000363823 204 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms