Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNORD116-6-201ENST00000384711 96 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 MIR487A-201ENST00000385009 80 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 RNA5SP323-201ENST00000391094 133 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 AL590002.1-201ENST00000406554 418 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 RPL30P13-201ENST00000418873 348 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 AC008134.1-201ENST00000420943 193 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX39AO00148 AC092473.1-201ENST00000441098 221 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 MTND1P29-201ENST00000448112 647 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX39AO00148 PCMTD1P1-201ENST00000455560 355 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX39AO00148 Y_RNA.704-201ENST00000516851 102 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 AC024995.1-201ENST00000523014 93 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 AP003465.2-201ENST00000602571 373 ntBASIC1.48□□□□□ -2.17
DDX39AO00148 SNORD50.1-201ENST00000362987 71 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 RNU4-9P-201ENST00000364951 139 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 Y_RNA.372-201ENST00000365599 102 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 RNU6-780P-201ENST00000391030 104 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.47□□□□□ -2.17
DDX39AO00148 MTND1P1-201ENST00000445453 368 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.47□□□□□ -2.17
DDX39AO00148 AC079354.2-201ENST00000453523 154 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 RPS26P45-201ENST00000471748 340 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 HMGN1P12-201ENST00000499125 195 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 AC005668.1-201ENST00000571142 476 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 AC097065.2-201ENST00000608159 533 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 AL078604.3-201ENST00000615580 211 ntBASIC1.47□□□□□ -2.17
DDX39AO00148 RNU6-1252P-201ENST00000363054 104 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 Y_RNA.151-201ENST00000363566 112 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 Y_RNA.287-201ENST00000364853 94 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 RNU6-483P-201ENST00000384088 108 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 SNORA67.2-201ENST00000384300 149 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 MIR194-1-201ENST00000384892 85 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 EIF1P1-201ENST00000421436 341 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 DAP3P1-201ENST00000441522 278 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 HMGN2P26-201ENST00000463169 339 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
DDX39AO00148 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.46□□□□□ -2.18
DDX39AO00148 MTND1P5-201ENST00000517906 940 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 POLR3GP2-201ENST00000588366 668 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.46□□□□□ -2.18
DDX39AO00148 SNORD115-32-201ENST00000364079 82 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 Y_RNA.530-201ENST00000384587 101 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 RNU6-950P-201ENST00000384651 107 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 Y_RNA.559-201ENST00000384686 107 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 MIR32-201ENST00000384965 70 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
DDX39AO00148 RNU6-908P-201ENST00000410160 94 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 Y_RNA.615-201ENST00000410769 117 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.45□□□□□ -2.18
DDX39AO00148 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.45□□□□□ -2.18
DDX39AO00148 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.45□□□□□ -2.18
DDX39AO00148 MTCO2P30-201ENST00000503662 364 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 Y_RNA.676-201ENST00000516393 96 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 RNU6-1198P-201ENST00000516904 67 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 AC099654.12-201ENST00000639868 649 ntBASIC1.45□□□□□ -2.18
DDX39AO00148 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
DDX39AO00148 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 RNU1-62P-201ENST00000362599 164 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 SNORD115-8-201ENST00000363856 82 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 SNORD115-38-201ENST00000365037 82 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 RNU6-95P-201ENST00000384697 107 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 RNA5SP467-201ENST00000391274 118 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
DDX39AO00148 AC016909.1-201ENST00000415916 166 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 SDAD1P3-201ENST00000427380 333 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 RNU6-221P-201ENST00000459541 99 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 RPL30P7-201ENST00000479312 323 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 ACA59.1-201ENST00000515966 143 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 AC025647.1-201ENST00000517879 253 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.44□□□□□ -2.18
DDX39AO00148 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.44□□□□□ -2.18
DDX39AO00148 AC092954.2-201ENST00000609103 430 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 AC040896.1-201ENST00000613819 479 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 AC006504.8-201ENST00000621046 635 ntBASIC1.44□□□□□ -2.18
DDX39AO00148 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
DDX39AO00148 Y_RNA.319-201ENST00000365138 92 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 RNU6-1240P-201ENST00000365155 104 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 RNU6-53P-201ENST00000365367 106 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 MIR153-2-201ENST00000385225 87 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 MTCO3P18-201ENST00000440206 761 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.43□□□□□ -2.18
DDX39AO00148 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.43□□□□□ -2.18
DDX39AO00148 FO393415.2-201ENST00000480085 343 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 AL138726.1-201ENST00000614873 333 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.43□□□□□ -2.18
DDX39AO00148 AC091895.1-201ENST00000624494 256 ntBASIC1.43□□□□□ -2.18
DDX39AO00148 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms