Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.7□□□□□ -2.14
NEDD8-MDP1E9PL57 MIR378A-201ENST00000362177 66 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 SNORA72.1-201ENST00000363485 129 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-331P-201ENST00000384724 107 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-159P-201ENST00000391080 106 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 MIR300-201ENST00000401138 83 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 MIR1283-1-201ENST00000408494 87 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 AL353689.1-201ENST00000438895 199 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 AC007395.1-201ENST00000451333 677 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU7-175P-201ENST00000515915 61 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 AP005660.1-201ENST00000522972 293 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 RRN3P3-201ENST00000549207 578 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 AC099654.5-201ENST00000636479 350 ntBASIC1.69□□□□□ -2.14
NEDD8-MDP1E9PL57 Y_RNA.2-201ENST00000362330 96 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 Y_RNA.319-201ENST00000365138 92 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-245P-201ENST00000384020 107 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-418P-201ENST00000384035 107 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-1026P-201ENST00000384465 108 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 SNORA75.4-201ENST00000391278 119 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AL512604.1-201ENST00000404812 257 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU4-62P-201ENST00000410125 130 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNA5SP504-201ENST00000410676 117 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNA5SP501-201ENST00000410990 112 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RPL23AP36-201ENST00000413895 458 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AC067942.3-201ENST00000512025 362 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-1198P-201ENST00000516904 67 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AC105029.1-201ENST00000520250 669 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AC005730.3-201ENST00000583067 366 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 AL355802.3-201ENST00000607571 545 ntBASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-23P-201ENST00000363283 107 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 BTF3P4-201ENST00000418852 495 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 USMG5P1-201ENST00000425964 177 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 AP000870.1-201ENST00000472927 406 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 HMGN2P9-201ENST00000476875 229 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 AC091951.2-201ENST00000500762 203 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-344P-201ENST00000516635 111 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-1213P-201ENST00000517075 94 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 UBL5P4-201ENST00000562584 236 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 UBE2V2P2-201ENST00000587677 504 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 AC005034.5-201ENST00000604219 466 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 AL773524.1-201ENST00000614065 229 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 AC130454.1-201ENST00000622948 401 ntBASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.67□□□□□ -2.14
NEDD8-MDP1E9PL57 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-874P-201ENST00000362390 105 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 Y_RNA.132-201ENST00000363421 102 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-873P-201ENST00000363833 107 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-975P-201ENST00000384296 105 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 MIR10B-201ENST00000385011 110 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 MIR586-201ENST00000385035 97 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 SNORA48.1-201ENST00000390879 135 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AL158823.1-201ENST00000418441 478 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 MTND3P23-201ENST00000431980 347 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AL445305.1-201ENST00000432577 575 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AL357134.1-201ENST00000445848 426 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AL117351.2-201ENST00000513571 157 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 RNU6-277P-201ENST00000516272 106 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 SNORA25.14-201ENST00000516481 132 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AC134698.4-201ENST00000523451 826 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AK6P2-201ENST00000549020 471 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AL121579.1-201ENST00000555129 305 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 AC243960.4-201ENST00000600532 288 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 7SK.7-201ENST00000603504 247 ntBASIC1.66□□□□□ -2.14
NEDD8-MDP1E9PL57 RNY1P16-201ENST00000363063 111 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 Y_RNA.106-201ENST00000363189 100 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 Y_RNA.142-201ENST00000363491 102 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 RNY3P14-201ENST00000384309 102 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 NCOR1P3-201ENST00000420479 303 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 MTND4P18-201ENST00000447010 465 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 Y_RNA.635-201ENST00000459041 101 ntBASIC1.65□□□□□ -2.15
NEDD8-MDP1E9PL57 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms