Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 OR2A41P-201ENST00000473586 105 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC083904.1-201ENST00000487828 231 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RPL39P5-202ENST00000512505 151 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC010620.1-201ENST00000601088 1102 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RPL17P51-201ENST00000605218 238 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC009509.4-201ENST00000619202 509 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AL359697.1-201ENST00000624879 587 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.358-201ENST00000365491 99 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 RNU6-378P-201ENST00000384324 107 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 RNU6-348P-201ENST00000384386 107 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MIR329-2-201ENST00000385029 84 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 HMGN2P39-201ENST00000398005 273 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MTCO3P41-201ENST00000414801 328 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 NCOR1P3-201ENST00000420479 303 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MTCO1P20-201ENST00000425366 358 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MTATP6P17-201ENST00000431030 672 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 SEPT14P3-201ENST00000439401 183 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AL359672.1-201ENST00000442302 409 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AL732372.2-207ENST00000445840 183 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 SEPT14P2-201ENST00000453405 183 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 SNORD5.1-201ENST00000458800 75 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 RNU7-180P-201ENST00000459240 63 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AC083798.1-201ENST00000472671 131 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AC093534.1-201ENST00000504977 132 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 SEPT14P4-201ENST00000513445 186 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 RNU6-667P-201ENST00000517186 102 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 FO082796.1-201ENST00000523795 183 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 HMGB1P33-201ENST00000563485 527 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 Z98751.3-201ENST00000604447 521 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 MIR3976-201ENST00000606807 139 ntBASIC0.6□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.132-201ENST00000363421 102 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 RNU6-336P-201ENST00000364891 107 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 RNU6-505P-201ENST00000384427 107 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 RNU6-780P-201ENST00000391030 104 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AL133475.1-201ENST00000404414 305 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 RNU6-325P-201ENST00000411132 105 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC096920.1-201ENST00000423991 241 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 USMG5P1-201ENST00000425964 177 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 SRRM1P2-201ENST00000464531 1192 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC005908.1-201ENST00000468701 347 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC018868.1-201ENST00000491307 315 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC019235.1-201ENST00000503847 207 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC074133.1-201ENST00000515696 183 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP285-201ENST00000516619 119 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 RNU6-323P-201ENST00000521915 107 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 MIR5094-201ENST00000578766 85 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC022432.1-201ENST00000595739 310 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AC013244.2-201ENST00000603396 103 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 uc_338.34-201ENST00000617467 174 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AL354950.2-201ENST00000617939 290 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 U1.36-201ENST00000620684 176 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 SCARNA4-201ENST00000629045 128 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 MIR1321-201ENST00000637766 79 ntBASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
COL6A6A6NMZ7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 RNU6-428P-201ENST00000362942 107 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 RNU6-254P-201ENST00000363377 107 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1042P-201ENST00000384204 107 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.517-201ENST00000384551 106 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 MIR450B-201ENST00000401182 78 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP501-201ENST00000410990 112 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 MTND1P17-201ENST00000448961 204 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 MTND3P16-201ENST00000452205 344 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 AC025465.4-201ENST00000513422 638 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.688-201ENST00000516565 95 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 RNU6-430P-201ENST00000517078 107 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 MIR4713-201ENST00000582691 75 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 AC243960.4-201ENST00000600532 288 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 AC069114.2-201ENST00000604699 304 ntBASIC0.59□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1085P-201ENST00000363576 107 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNU6-522P-201ENST00000364497 107 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNU4-24P-201ENST00000364565 139 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.318-201ENST00000365131 97 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms