Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC027288.2-201ENST00000553028 243 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 AC133485.4-201ENST00000561835 220 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 AC100830.2-201ENST00000581636 240 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 AC026585.1-201ENST00000619582 524 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 MIR7111-201ENST00000619751 72 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 AC099654.8-201ENST00000637757 681 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 MIR4788-201ENST00000639104 80 ntBASIC-0.68□□□□□ -2.52
CPSF4LA6NMK7 RNA5SP257-201ENST00000363023 116 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 RNU6-853P-201ENST00000364306 107 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 MTND3P20-201ENST00000407663 186 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 AL031779.1-201ENST00000415663 330 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 AC026414.1-201ENST00000504046 698 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 AC090897.1-201ENST00000580909 226 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 MIR4432-201ENST00000581823 84 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 AL359697.1-201ENST00000624879 587 ntBASIC-0.69□□□□□ -2.52
CPSF4LA6NMK7 MIR101-1-201ENST00000362265 75 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 RNU4-84P-201ENST00000364200 139 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 SNORD32A-201ENST00000364805 84 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 AC133104.1-201ENST00000429100 218 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 SUMO1P2-201ENST00000452524 304 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 AP001372.4-201ENST00000524889 472 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 U4.7-201ENST00000638126 106 ntBASIC-0.7□□□□□ -2.52
CPSF4LA6NMK7 RNU6-527P-201ENST00000363425 104 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 SNORD114-11-201ENST00000363738 75 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 SNORD49B-201ENST00000365172 72 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RNU6-692P-201ENST00000384496 107 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 MIR578-201ENST00000384828 96 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AL136310.1-201ENST00000404926 654 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 MIR1185-2-201ENST00000408687 86 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RNU2-3P-201ENST00000410144 191 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RNU4-22P-201ENST00000411058 166 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 DEFB130D-201ENST00000426866 237 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC078809.1-201ENST00000427601 140 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RPS29P15-201ENST00000458329 171 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RNU7-94P-201ENST00000459576 63 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 RPL39P34-201ENST00000477141 156 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC016632.1-201ENST00000503994 196 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 SNORA18.7-201ENST00000516910 131 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC025647.1-201ENST00000517879 253 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC026616.1-201ENST00000523157 525 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC021451.1-201ENST00000523498 1129 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC026371.1-201ENST00000551867 419 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AL512347.1-201ENST00000566420 503 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 MIR4676-201ENST00000583078 72 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 MIR548AC-201ENST00000585049 88 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 VN1R87P-201ENST00000596706 487 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC174048.1-201ENST00000603389 144 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC090186.1-201ENST00000605991 572 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC100814.1-201ENST00000606963 623 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 U6.42-201ENST00000618440 107 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 AC005592.1-201ENST00000566527 1640 ntBASIC-0.71□□□□□ -2.52
CPSF4LA6NMK7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 SNORA72.1-201ENST00000363485 129 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RNU6-580P-201ENST00000365159 107 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RNU6-481P-201ENST00000384194 107 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RNU2-42P-201ENST00000410697 113 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RPS24P1-201ENST00000438550 371 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 MTND4P19-201ENST00000446659 478 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AP000542.1-201ENST00000448473 371 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 USP9YP25-201ENST00000457708 443 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 SNRPGP7-201ENST00000469016 106 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AC114755.3-201ENST00000481111 251 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RNU7-99P-201ENST00000516271 62 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AP002453.2-201ENST00000533503 320 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AC093027.1-201ENST00000546698 429 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AC138869.1-201ENST00000568623 124 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 MIR4771-2-201ENST00000577758 74 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 MIR3152-201ENST00000579801 74 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 MIR4771-1-201ENST00000582617 74 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AC008608.1-201ENST00000603910 127 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AC020891.4-201ENST00000605745 93 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 RNU1-29P-201ENST00000606574 126 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 AC010999.1-201ENST00000611856 324 ntBASIC-0.72□□□□□ -2.52
CPSF4LA6NMK7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CPSF4LA6NMK7 SNORD115-24-201ENST00000363528 82 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms