Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 HMGN2P9-201ENST00000476875 229 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 RPL17P19-201ENST00000489069 552 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 HMGB3P17-201ENST00000504195 649 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC022493.2-201ENST00000506122 481 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 MRPS17P9-201ENST00000511924 393 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 RNU6-264P-201ENST00000517134 104 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 SNORD11B-201ENST00000607707 90 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 AL359697.1-201ENST00000624879 587 ntBASIC2.23□□□□□ -2.05
CCDC196A0A1B0GTZ2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 SNORD114-1-201ENST00000362705 72 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 Y_RNA.67-201ENST00000362870 100 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 RNA5SP501-201ENST00000410990 112 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 MTCO1P44-201ENST00000441935 243 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC114982.1-201ENST00000469402 321 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC091179.3-201ENST00000474761 144 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 RNA5SP182-201ENST00000516064 82 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC087441.2-201ENST00000529141 262 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC093027.1-201ENST00000546698 429 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC084781.2-201ENST00000615568 161 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 AC112487.2-201ENST00000637950 304 ntBASIC2.22□□□□□ -2.05
CCDC196A0A1B0GTZ2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.358-201ENST00000365491 99 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-793P-201ENST00000384233 104 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-57P-201ENST00000411348 103 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 MTATP6P23-201ENST00000440153 476 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-1114P-201ENST00000516022 107 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 SUMO2P18-201ENST00000518873 252 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC093023.1-201ENST00000547375 507 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 AL109918.3-201ENST00000603072 338 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC025253.1-201ENST00000613623 543 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC008555.8-201ENST00000623602 2168 ntBASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CCDC196A0A1B0GTZ2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC009487.4-201ENST00000624969 3585 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.58-201ENST00000362807 102 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.154-201ENST00000363624 102 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-879P-201ENST00000364328 108 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNY3P1-201ENST00000365085 102 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNY3-201ENST00000365484 102 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 SNORA75.6-201ENST00000391318 127 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 SNORA11.2-201ENST00000408318 127 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC010095.1-201ENST00000443543 144 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC074290.1-201ENST00000448883 135 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.632-201ENST00000459189 102 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU7-57P-201ENST00000459540 60 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-344P-201ENST00000516635 111 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-107P-201ENST00000516643 102 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC022868.1-201ENST00000517767 391 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 MIR3945-201ENST00000581853 98 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 MZT1P2-201ENST00000604387 248 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC010999.1-201ENST00000611856 324 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC006001.4-201ENST00000622243 395 ntBASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC196A0A1B0GTZ2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-137P-201ENST00000363680 108 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.263-201ENST00000364659 114 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 Y_RNA.364-201ENST00000365532 101 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-975P-201ENST00000384296 105 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 SNORD116-29-201ENST00000384516 83 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 MIR586-201ENST00000385035 97 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNY4P36-201ENST00000391116 96 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 AL512604.1-201ENST00000404812 257 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNA5SP504-201ENST00000410676 117 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-1001P-201ENST00000411265 100 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU1-131P-201ENST00000458943 161 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 U8.22-201ENST00000459141 133 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 MIR2053-201ENST00000459295 91 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC105758.1-201ENST00000506038 399 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU6-948P-201ENST00000516374 107 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 AC133104.2-201ENST00000615272 193 ntBASIC2.19□□□□□ -2.06
CCDC196A0A1B0GTZ2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC196A0A1B0GTZ2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC196A0A1B0GTZ2 RNU1-62P-201ENST00000362599 164 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms