Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-418P-201ENST00000384035 107 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 AC114982.1-201ENST00000469402 321 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 SRIP1-201ENST00000489235 288 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.673-201ENST00000516306 88 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 AC022441.3-201ENST00000605737 136 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 AC245060.5-201ENST00000610778 3293 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.1□□□□□ -1.91
CCDC163A0A0D9SF12 AC131280.1-202ENST00000624067 4211 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 SNORD31B-201ENST00000364977 69 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.383-201ENST00000383855 97 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 Y_RNA.489-201ENST00000384410 101 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC021205.2-201ENST00000480069 347 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-966P-201ENST00000516479 104 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 RNU6-667P-201ENST00000517186 102 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC104984.5-201ENST00000586878 94 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.09□□□□□ -1.91
CCDC163A0A0D9SF12 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.09□□□□□ -1.92
CCDC163A0A0D9SF12 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 SNORD27-201ENST00000363981 72 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-454P-201ENST00000364292 107 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 SNORA20.1-201ENST00000364790 130 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-1072P-201ENST00000384703 107 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-443P-201ENST00000384780 107 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-57P-201ENST00000411348 103 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 AL135938.1-201ENST00000443141 297 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 MRPS10P1-201ENST00000448483 130 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 AC008873.1-201ENST00000625051 138 ntBASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-514P-201ENST00000384208 107 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AL139095.1-201ENST00000404326 391 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 RNU2-54P-201ENST00000410299 190 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC009963.1-201ENST00000417265 157 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 TOMM22P2-201ENST00000430735 237 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 MTND4LP30-201ENST00000454092 297 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 Y_RNA.680-201ENST00000516441 93 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 RNU2-31P-201ENST00000516954 155 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-388P-201ENST00000517012 105 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-389P-201ENST00000517048 105 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 PRELID2P1-201ENST00000552837 301 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 MIR4738-201ENST00000579134 87 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 MIR3145-201ENST00000580727 82 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC010900.2-201ENST00000604508 210 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 AC096644.4-201ENST00000563417 2912 ntBASIC3.07□□□□□ -1.92
CCDC163A0A0D9SF12 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 SNORA25.1-201ENST00000362326 128 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-379P-201ENST00000363813 104 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 AC009238.1-201ENST00000442165 424 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 AC009237.6-201ENST00000446969 424 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 AL136360.1-201ENST00000503377 1900 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 SERF1AP1-201ENST00000514575 187 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 MIR4658-201ENST00000584344 65 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC163A0A0D9SF12 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC062016.1-201ENST00000355719 319 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 Y_RNA.60-201ENST00000362831 98 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 SNORA25B-201ENST00000365507 128 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC063976.3-201ENST00000426849 329 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC093259.1-201ENST00000509755 300 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-948P-201ENST00000516374 107 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 AC005357.1-201ENST00000588399 301 ntBASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC163A0A0D9SF12 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 MIR335-201ENST00000362173 94 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 Y_RNA.277-201ENST00000364754 102 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms