Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RPL19P1-201ENST00000411635 428 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC025750.2-201ENST00000442609 450 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU7-26P-201ENST00000458980 63 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU7-57P-201ENST00000459540 60 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC114982.1-201ENST00000469402 321 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 SRIP1-201ENST00000489235 288 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORA31.26-201ENST00000517250 137 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 EIF4BP1-201ENST00000554881 351 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC008749.1-201ENST00000597650 306 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL590240.4-201ENST00000616908 390 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL449363.1-201ENST00000617815 186 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 SDR42E1P4-201ENST00000620894 481 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC127459.3-201ENST00000624328 466 ntBASIC2.13□□□□□ -2.07
IGHV4-28A0A0C4DH34 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC092593.1-201ENST00000515413 1815 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORA9.2-201ENST00000365361 133 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.350-201ENST00000365409 98 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-418P-201ENST00000384035 107 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.447-201ENST00000384184 113 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-975P-201ENST00000384296 105 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.477-201ENST00000384352 108 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORD14D-201ENST00000384390 87 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.518-201ENST00000384552 113 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.569-201ENST00000384749 103 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL031121.1-201ENST00000406553 254 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU2-54P-201ENST00000410299 190 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-1199P-201ENST00000411249 104 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC009963.1-201ENST00000417265 157 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC244505.4-201ENST00000434905 287 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 POLR2KP2-201ENST00000438155 177 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC009238.1-201ENST00000442165 424 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 SSXP5-201ENST00000443473 287 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC009237.6-201ENST00000446969 424 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 MRPS10P1-201ENST00000448483 130 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC074290.1-201ENST00000448883 135 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL137159.1-201ENST00000452808 512 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RN7SL75P-201ENST00000461926 281 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RPL39P38-201ENST00000467018 153 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RN7SL633P-201ENST00000488974 297 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.680-201ENST00000516441 93 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU2-12P-201ENST00000517216 168 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR3671-201ENST00000580455 88 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC012433.1-201ENST00000588916 398 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL355596.1-201ENST00000565399 3996 ntBASIC2.12□□□□□ -2.07
IGHV4-28A0A0C4DH34 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.383-201ENST00000383855 97 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR634-201ENST00000385208 97 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR1185-2-201ENST00000408687 86 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC093259.1-201ENST00000509755 300 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC006380.1-201ENST00000603598 186 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC013412.1-201ENST00000610687 192 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR7106-201ENST00000612419 65 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 snoZ196.1-201ENST00000625269 89 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL161431.1-201ENST00000618966 4205 ntBASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.11□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR335-201ENST00000362173 94 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-324P-201ENST00000363957 106 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-851P-201ENST00000384565 107 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.562-201ENST00000384695 113 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-1072P-201ENST00000384703 107 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-443P-201ENST00000384780 107 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORA53-201ENST00000391141 249 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 BMS1P22-201ENST00000414726 313 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL139132.1-201ENST00000431587 344 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC107083.1-201ENST00000439643 279 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 PRELID3BP1-201ENST00000457142 540 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 AP001486.1-201ENST00000463339 476 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC010531.2-201ENST00000465012 153 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 MTND1P19-201ENST00000511780 315 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 SERF1AP1-201ENST00000514575 187 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU2-31P-201ENST00000516954 155 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR3145-201ENST00000580727 82 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 MIR3128-201ENST00000581957 66 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC037487.3-201ENST00000606668 112 ntBASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.1□□□□□ -2.07
IGHV4-28A0A0C4DH34 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms