Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 Y_RNA.265-201ENST00000364677 108 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 SNORD105-201ENST00000386910 85 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 MIR320B2-201ENST00000408479 138 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 RNU6-177P-201ENST00000411257 104 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AL663109.1-201ENST00000411498 844 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 RNU6-1220P-201ENST00000517126 108 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AC069113.1-201ENST00000517763 267 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 MIR3192-201ENST00000584920 77 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AC002044.1-201ENST00000606707 158 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AC009159.2-201ENST00000617603 606 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AC008873.1-201ENST00000625051 138 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AL138960.2-201ENST00000625145 535 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 AL390237.1-201ENST00000404226 1415 ntBASIC0.04□□□□□ -2.4
TRAV4A0A0B4J268 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNU6-169P-201ENST00000365336 107 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNY1P8-201ENST00000383970 114 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 SNORA67.2-201ENST00000384300 149 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNU6-1106P-201ENST00000390845 107 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNA5SP494-201ENST00000410653 129 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNU2-70P-201ENST00000410718 179 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNU4-46P-201ENST00000410818 138 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 MTCO2P34-201ENST00000421994 607 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 EPS15P1-201ENST00000448836 336 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AC007215.1-201ENST00000464893 276 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNU7-28P-201ENST00000516759 62 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 RNU6-323P-201ENST00000521915 107 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AC005771.1-201ENST00000585581 349 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AC138749.5-201ENST00000611461 208 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 AC004808.1-201ENST00000627671 721 ntBASIC0.03□□□□□ -2.4
TRAV4A0A0B4J268 Y_RNA.122-201ENST00000363331 96 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 MIR598-201ENST00000384868 97 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNA5SP219-201ENST00000390940 113 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-994P-201ENST00000410507 111 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNU2-69P-201ENST00000516061 100 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 PCMTD1P2-201ENST00000565017 355 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 MIR3941-201ENST00000582572 103 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC068790.2-201ENST00000602601 557 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC069431.2-201ENST00000604149 1099 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC008133.2-201ENST00000624540 351 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC010487.4-201ENST00000637027 61 ntBASIC0.02□□□□□ -2.41
TRAV4A0A0B4J268 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-266P-201ENST00000364225 107 ntBASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 SNORD70.1-201ENST00000391007 85 ntBASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-1242P-201ENST00000391052 103 ntBASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 SNORD111-201ENST00000408139 94 ntBASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 MIR1295A-201ENST00000408463 79 ntBASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 RPL31P35-201ENST00000431058 377 ntBASIC0.01□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-1266P-201ENST00000362794 105 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU5F-6P-201ENST00000362979 116 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU5B-2P-201ENST00000363036 113 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-501P-201ENST00000364072 100 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 Y_RNA.476-201ENST00000384347 108 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-1105P-201ENST00000384774 107 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 MTCO2P3-201ENST00000442543 421 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU7-182P-201ENST00000459009 62 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 AP000870.1-201ENST00000472927 406 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-344P-201ENST00000516635 111 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-410P-201ENST00000517006 107 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-94P-201ENST00000607728 107 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 uc_338.11-201ENST00000619132 160 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 MIR6079-201ENST00000635807 62 ntBASIC0□□□□□ -2.41
TRAV4A0A0B4J268 RNU4-67P-201ENST00000364569 141 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 CALM2P3-201ENST00000400429 449 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 MIR1827-201ENST00000408549 66 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 snoU13.18-201ENST00000459483 104 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 SNORA62.5-201ENST00000516634 120 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 RNU1-117P-201ENST00000517041 158 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AC090572.1-201ENST00000519251 160 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AF235103.2-201ENST00000525753 346 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AP003716.2-201ENST00000528260 108 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 MIR4775-201ENST00000581168 75 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AL117336.2-201ENST00000602435 335 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AC023932.2-201ENST00000603176 175 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 MIR98-201ENST00000606724 119 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AC122133.1-201ENST00000613964 233 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 AL133173.2-201ENST00000614270 90 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 SEPT14P19-203ENST00000633205 211 ntBASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
TRAV4A0A0B4J268 MIR103A1-201ENST00000362165 78 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-227P-201ENST00000362865 103 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms