Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 Y_RNA.330-201ENST00000365230 109 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-163P-201ENST00000384396 106 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU1-119P-201ENST00000391122 165 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RPS26P42-201ENST00000413485 326 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AC106883.1-201ENST00000418805 562 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AL354692.1-201ENST00000423044 315 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 DAP3P1-201ENST00000441522 278 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AC093850.1-201ENST00000454121 251 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 snoU13.25-201ENST00000458945 104 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-221P-201ENST00000459541 99 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-496P-201ENST00000516145 99 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-410P-201ENST00000517006 107 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-1223P-201ENST00000517124 104 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AL137100.2-201ENST00000555786 315 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AC234772.3-201ENST00000602277 528 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 SNORA28-201ENST00000606769 126 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AC004832.4-201ENST00000608952 331 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AC091304.9-201ENST00000612091 226 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 AC068787.1-201ENST00000623908 691 ntBASIC0.21□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-1029P-201ENST00000384109 107 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-906P-201ENST00000384700 70 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 RNA5SP247-201ENST00000411181 105 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC244098.3-201ENST00000424803 96 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 CALM2P4-201ENST00000430810 426 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 RPL23AP50-201ENST00000434149 455 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AL512286.1-201ENST00000439244 400 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 USP9YP12-201ENST00000450481 570 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 TPT1P7-201ENST00000458300 517 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU7-182P-201ENST00000459009 62 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC010493.1-201ENST00000513479 292 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC022878.1-201ENST00000530684 149 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AGGF1P4-201ENST00000568249 801 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC023827.1-201ENST00000569247 97 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR4509-3-201ENST00000578671 94 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 MTND1P15-201ENST00000579262 949 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR4509-2-201ENST00000583920 94 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC131055.1-201ENST00000584626 316 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AL078603.1-201ENST00000603824 313 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 AC107308.1-201ENST00000615897 301 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR4509-1-201ENST00000618224 94 ntBASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.2□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU5E-5P-201ENST00000365379 116 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 SNORA67.2-201ENST00000384300 149 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-424P-201ENST00000384367 105 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR499A-201ENST00000384903 122 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR454-201ENST00000390180 115 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 U8.16-201ENST00000391279 133 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 RNA5SP494-201ENST00000410653 129 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AL162725.1-201ENST00000435405 301 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC104332.1-201ENST00000440471 797 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 MTCO2P7-201ENST00000446518 666 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU7-94P-201ENST00000459576 63 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU7-99P-201ENST00000516271 62 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 Vault.3-201ENST00000516676 95 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC069113.1-201ENST00000517763 267 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC106038.2-201ENST00000520706 568 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC109810.1-201ENST00000534066 224 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC011195.1-201ENST00000578177 177 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC068790.2-201ENST00000602601 557 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 U6.73-201ENST00000619194 103 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 SEPT14P19-203ENST00000633205 211 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 AC006927.3-201ENST00000638789 384 ntBASIC0.19□□□□□ -2.38
TMEM56-RWDD3S4R434 MTND5P16-201ENST00000460269 1703 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU5B-2P-201ENST00000363036 113 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 Y_RNA.224-201ENST00000364308 111 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-1127P-201ENST00000384580 107 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-1067P-201ENST00000384752 107 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RNA5SP222-201ENST00000411039 105 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC079781.2-201ENST00000446424 169 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 OR9P1P-201ENST00000496431 281 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RPL39P5-202ENST00000512505 151 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-1110P-201ENST00000516462 101 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU2-46P-201ENST00000517038 113 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC022868.1-201ENST00000517767 391 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR3124-201ENST00000582636 67 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC025449.1-201ENST00000603896 529 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 SNRPGP20-201ENST00000604477 205 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC018645.2-201ENST00000609151 472 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC008873.1-201ENST00000625051 138 ntBASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.18□□□□□ -2.38
TMEM56-RWDD3S4R434 AC100810.6-201ENST00000638068 285 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms