Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AK6P2-201ENST00000549020 471 ntBASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 AC136932.1-201ENST00000574771 208 ntBASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.23□□□□□ -1.89
PTCH2Q9Y6C5 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 RNU6-806P-201ENST00000365147 105 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 RNU6-1310P-201ENST00000384153 107 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 MIR300-201ENST00000401138 83 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 RNU2-32P-201ENST00000411193 191 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 AC092427.1-202ENST00000430569 476 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 AL445687.1-201ENST00000439946 251 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 snoU13.23-201ENST00000458863 104 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 RPS29P21-201ENST00000496272 170 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 Y_RNA.676-201ENST00000516393 96 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 AC022616.8-201ENST00000533569 253 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 AC005176.2-201ENST00000596933 147 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 AL355297.2-201ENST00000604792 129 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.22□□□□□ -1.89
PTCH2Q9Y6C5 Y_RNA.26-201ENST00000362539 101 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.105-201ENST00000363182 111 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-626P-201ENST00000363354 107 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-961P-201ENST00000363893 105 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 SNORA72.2-201ENST00000365028 127 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-20P-201ENST00000384106 107 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-937P-201ENST00000384325 106 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-121P-201ENST00000410525 99 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RAB28P5-201ENST00000427490 651 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 AC074290.1-201ENST00000448883 135 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 AC078899.3-201ENST00000599065 212 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 AC107871.2-201ENST00000612894 502 ntBASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTCH2Q9Y6C5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.222-201ENST00000364264 102 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.288-201ENST00000364854 92 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-1180P-201ENST00000364935 107 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 MIR586-201ENST00000385035 97 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 MIR764-201ENST00000390811 85 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.618-201ENST00000410949 107 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 ELOCP21-201ENST00000412558 336 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 AL603825.1-201ENST00000438481 80 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 NDUFB4P10-201ENST00000452541 359 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 RNU7-14P-201ENST00000459331 62 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 AC114982.1-201ENST00000469402 321 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 MIR449C-201ENST00000516047 92 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.673-201ENST00000516306 88 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 AC109329.2-201ENST00000519658 482 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 MIR4423-201ENST00000580922 80 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 AC090616.3-201ENST00000582184 217 ntBASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTCH2Q9Y6C5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 MIR410-201ENST00000362222 80 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 U3.8-201ENST00000363675 217 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-21P-201ENST00000384710 107 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.570-201ENST00000384750 101 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 MIR561-201ENST00000385216 97 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.581-201ENST00000391017 97 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AL357139.1-201ENST00000407792 426 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AC009963.1-201ENST00000417265 157 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 RPL21P38-201ENST00000418090 167 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 TRBVB-201ENST00000477100 408 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 RNU6-107P-201ENST00000516643 102 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 SNORD113-5-201ENST00000607261 78 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AC011373.1-201ENST00000607270 237 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 AC093010.3-201ENST00000570269 15214 ntBASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PTCH2Q9Y6C5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 SNORD113-8-201ENST00000363497 74 ntBASIC3.18□□□□□ -1.9
PTCH2Q9Y6C5 Y_RNA.376-201ENST00000365638 108 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms