Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MT-TW-201ENST00000387382 68 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.618-201ENST00000410949 107 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 RNA5SP270-201ENST00000411361 118 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 AC008155.2-201ENST00000464337 397 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 AC062037.2-201ENST00000610137 73 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 MIR340-201ENST00000362125 95 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORD115-3-201ENST00000363100 82 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-514P-201ENST00000384208 107 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-574P-201ENST00000384265 107 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 AL031003.1-201ENST00000404229 172 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 RN7SL385P-201ENST00000468873 276 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-436P-201ENST00000516171 114 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 MIR7641-1-201ENST00000627518 61 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
GTF3C3Q9Y5Q9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-23P-201ENST00000363283 107 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU1-52P-201ENST00000384190 164 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.483-201ENST00000384380 101 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-102P-201ENST00000384485 104 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 AC007064.1-201ENST00000412238 351 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 RPL18P10-201ENST00000425606 538 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 SUMO1P4-201ENST00000429430 302 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 SCARNA13-201ENST00000516672 275 ntBASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.1□□□□□ -1.75
GTF3C3Q9Y5Q9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU1-58P-201ENST00000362413 163 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.136-201ENST00000363444 102 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORA25.6-201ENST00000364121 118 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORD114-6-201ENST00000364393 72 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORA56-201ENST00000383966 129 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORA20B-201ENST00000384220 132 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 MIR873-201ENST00000401120 77 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC060773.1-201ENST00000421698 310 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORD127-201ENST00000458892 86 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC011406.1-201ENST00000512440 370 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC026402.1-201ENST00000513642 170 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 SERF1AP1-201ENST00000514575 187 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.668-201ENST00000516233 93 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 DEFB108E-201ENST00000524692 240 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC107016.2-201ENST00000547968 190 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AL137100.2-201ENST00000555786 315 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 MIR4700-201ENST00000578311 74 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.15-201ENST00000611544 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.16-201ENST00000613119 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 AC022202.1-201ENST00000613515 211 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.12-201ENST00000613778 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.20-201ENST00000613956 192 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.9-201ENST00000615427 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.11-201ENST00000616345 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.2-201ENST00000616535 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.3-201ENST00000617785 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.19-201ENST00000618602 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU2-1-201ENST00000618664 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.6-201ENST00000619225 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.5-201ENST00000619465 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 U2.10-201ENST00000620268 191 ntBASIC4.09□□□□□ -1.75
GTF3C3Q9Y5Q9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 SNORA25.1-201ENST00000362326 128 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 RNA5SP493-201ENST00000364115 91 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU6-1164P-201ENST00000364428 107 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 Y_RNA.329-201ENST00000365209 107 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 RNA5SP274-201ENST00000410484 108 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 ATP5J2P3-201ENST00000451550 258 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 IGKV2-26-201ENST00000518305 343 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 AC004486.1-201ENST00000546846 233 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR4284-201ENST00000578924 81 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 uc_338.25-201ENST00000613756 156 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 AC245060.5-201ENST00000610778 3293 ntBASIC4.08□□□□□ -1.76
GTF3C3Q9Y5Q9 MTND5P6-201ENST00000422338 1798 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 AC093010.3-201ENST00000570269 15214 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 CENPCP1-201ENST00000533085 2578 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 Y_RNA.518-201ENST00000384552 113 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU11-5P-201ENST00000391216 129 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU6-1132P-201ENST00000459214 107 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 AP001282.2-201ENST00000616149 309 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 AC009487.2-201ENST00000420969 6821 ntBASIC4.07□□□□□ -1.76
GTF3C3Q9Y5Q9 AL121890.1-201ENST00000435457 205 ntBASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 RPL23AP3-201ENST00000453844 468 ntBASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms