Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.83□□□□□ -2.12
PCDHGA1Q9Y5H4 BX322639.1-202ENST00000423987 2213 ntBASIC1.83□□□□□ -2.12
PCDHGA1Q9Y5H4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-457P-201ENST00000363999 107 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR300-201ENST00000401138 83 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 Z82188.1-201ENST00000436709 154 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 HSBP1P1-201ENST00000555205 166 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR4273-201ENST00000582824 84 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR5006-201ENST00000583027 110 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 SNRPGP20-201ENST00000604477 205 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AL590240.4-201ENST00000616908 390 ntBASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.82□□□□□ -2.12
PCDHGA1Q9Y5H4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-545P-201ENST00000362681 104 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 SNORD115-8-201ENST00000363856 82 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 Y_RNA.279-201ENST00000364763 95 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 SNORD115-38-201ENST00000365037 82 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 Y_RNA.339-201ENST00000365325 102 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-767P-201ENST00000384132 107 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-842P-201ENST00000384269 107 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR32-201ENST00000384965 70 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR487A-201ENST00000385009 80 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR549A-201ENST00000385268 96 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MT-TL1-201ENST00000386347 75 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 BTF3P4-201ENST00000418852 495 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC243428.1-201ENST00000421099 264 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC139712.2-201ENST00000424302 339 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC092473.1-201ENST00000441098 221 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MTCO1P44-201ENST00000441935 243 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC009237.7-201ENST00000447357 229 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MTCO3P8-201ENST00000453691 755 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 snoU13.30-201ENST00000458951 104 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 SNORD13-201ENST00000459299 104 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC027575.1-201ENST00000481064 460 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AL163540.1-201ENST00000485382 386 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 RNA5SP54-201ENST00000516951 92 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 SUMO2P18-201ENST00000518873 252 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 SUB1P3-201ENST00000564581 315 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
PCDHGA1Q9Y5H4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 Y_RNA.160-201ENST00000363677 92 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-1059P-201ENST00000363752 98 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 Y_RNA.533-201ENST00000384596 114 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR320B2-201ENST00000408479 138 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 AC074085.1-201ENST00000413598 418 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 EBAG9P1-201ENST00000418955 543 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 RPL31P58-201ENST00000469001 379 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU7-30P-201ENST00000516835 62 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 CBX3P4-201ENST00000538909 354 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 AC103810.8-201ENST00000607347 118 ntBASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PCDHGA1Q9Y5H4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-845P-201ENST00000362578 103 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-137P-201ENST00000363680 108 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-593P-201ENST00000364716 112 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-876P-201ENST00000391295 104 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 MIR548F5-201ENST00000408421 86 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 AC004866.1-201ENST00000411748 78 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 AC010531.2-201ENST00000465012 153 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RPL30P10-201ENST00000488148 337 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 RNU6-58P-201ENST00000517143 103 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 AC018462.2-201ENST00000605375 395 ntBASIC1.79□□□□□ -2.12
PCDHGA1Q9Y5H4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms