Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-529P-201ENST00000363383 104 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-142P-201ENST00000384019 107 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD12B-201ENST00000410433 91 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 PTGES3P4-201ENST00000426243 356 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AL121890.1-201ENST00000435457 205 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AL109933.2-201ENST00000452651 260 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR4643-201ENST00000577473 78 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 AC141273.2-201ENST00000618989 130 ntBASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGB1Q9Y5G3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC092268.1-201ENST00000342691 405 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR335-201ENST00000362173 94 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD113-8-201ENST00000363497 74 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-961P-201ENST00000363893 105 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORA20.1-201ENST00000364790 130 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR196B-201ENST00000384852 84 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AL603910.2-201ENST00000407268 136 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR548I3-201ENST00000408378 149 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR548I1-201ENST00000408810 149 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 Y_RNA.602-201ENST00000410535 92 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU2-64P-201ENST00000411315 191 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RPS26P42-201ENST00000413485 326 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC009310.1-201ENST00000414414 451 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-966P-201ENST00000516479 104 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 RN7SKP49-201ENST00000516675 260 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD19.2-201ENST00000516978 73 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC021231.3-201ENST00000558497 370 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC055872.1-201ENST00000570978 278 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC127459.3-201ENST00000624328 466 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AC010889.1-201ENST00000566193 2666 ntBASIC2.37□□□□□ -2.03
PCDHGB1Q9Y5G3 AL391987.6-201ENST00000305671 199 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD81.1-201ENST00000363064 77 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-873P-201ENST00000363833 107 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD27-201ENST00000363981 72 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORA18.3-201ENST00000384122 132 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD63-201ENST00000384262 68 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 SNORD58.1-201ENST00000391313 66 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 RNA5SP21-201ENST00000410917 96 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AL590135.1-201ENST00000422215 156 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AC012306.1-201ENST00000423267 114 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AC019205.3-201ENST00000424573 156 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AIMP1P2-201ENST00000425294 312 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AC063976.3-201ENST00000426849 329 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 RPS23P5-201ENST00000495419 428 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 HMGB1P35-201ENST00000503360 598 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU5B-3P-201ENST00000516601 115 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-567P-201ENST00000516746 107 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AL109918.3-201ENST00000603072 338 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 AC005296.1-201ENST00000616145 209 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 U6.104-201ENST00000637979 90 ntBASIC2.36□□□□□ -2.03
PCDHGB1Q9Y5G3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-338P-201ENST00000383888 105 ntBASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-748P-201ENST00000384648 107 ntBASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-19P-201ENST00000384718 107 ntBASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU6-750P-201ENST00000390946 107 ntBASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 AL138827.1-201ENST00000402666 306 ntBASIC2.35□□□□□ -2.03
PCDHGB1Q9Y5G3 RNU4-30P-201ENST00000410245 143 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms