Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.279-201ENST00000364763 95 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 SNORD14D-201ENST00000384390 87 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AC074085.1-201ENST00000413598 418 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.15□□□□□ -2.23
SHANK1Q9Y566 RNU6-1016P-201ENST00000516689 94 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AF235103.2-201ENST00000525753 346 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 CYCSP26-201ENST00000534107 320 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 HSPE1P4-201ENST00000550617 308 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 MIR5006-201ENST00000583027 110 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 CYP2C61P-201ENST00000604072 290 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AP000654.2-201ENST00000605633 586 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AL132765.2-201ENST00000610812 351 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AL138726.1-201ENST00000614873 333 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AC022306.2-201ENST00000617563 647 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.15□□□□□ -2.23
SHANK1Q9Y566 AL359697.1-201ENST00000624879 587 ntBASIC1.15□□□□□ -2.23
SHANK1Q9Y566 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
SHANK1Q9Y566 Y_RNA.414-201ENST00000384011 101 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNU6-692P-201ENST00000384496 107 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNU6-831P-201ENST00000384548 107 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNA5SP219-201ENST00000390940 113 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AL355497.1-201ENST00000406262 551 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNA5SP201-201ENST00000410316 124 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AL589823.1-201ENST00000429577 183 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.14□□□□□ -2.23
SHANK1Q9Y566 PRELID3BP1-201ENST00000457142 540 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 HAR1A.1-201ENST00000459583 118 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNU6-329P-201ENST00000459618 107 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RPL17P19-201ENST00000489069 552 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC022447.4-201ENST00000504053 364 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNU6-256P-201ENST00000516747 97 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 MIR3126-201ENST00000577443 74 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 MIR5000-201ENST00000577717 103 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AL034555.1-201ENST00000604816 211 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC100810.6-201ENST00000638068 285 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 RNU1-148P-201ENST00000384472 162 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 USP9YP16-201ENST00000430287 407 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC079354.2-201ENST00000453523 154 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 USP9YP23-201ENST00000455085 407 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC093259.1-201ENST00000509755 300 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 SNORA48.11-201ENST00000517015 89 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AP000907.4-201ENST00000604143 237 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC019193.3-201ENST00000609144 554 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.14□□□□□ -2.23
SHANK1Q9Y566 AC091895.1-201ENST00000624494 256 ntBASIC1.14□□□□□ -2.23
SHANK1Q9Y566 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.14□□□□□ -2.23
SHANK1Q9Y566 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
SHANK1Q9Y566 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RNU6-1188P-201ENST00000363795 107 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 SNORD31B-201ENST00000364977 69 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 Y_RNA.373-201ENST00000365600 103 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 MIR625-201ENST00000385047 85 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RNA5SP465-201ENST00000391195 109 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 MIR1283-1-201ENST00000408494 87 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RNU6-1156P-201ENST00000410365 100 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC004223.1-201ENST00000479840 271 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 PRDX4P1-201ENST00000507189 574 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RNU5F-4P-201ENST00000516581 114 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 CBX3P8-201ENST00000532412 525 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 SUB1P4-201ENST00000566062 339 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 POLR3GP2-201ENST00000588366 668 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 MIR6128-201ENST00000615528 109 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 SNORA32.2-201ENST00000384049 122 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 Y_RNA.504-201ENST00000384481 104 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC243428.1-201ENST00000421099 264 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 MTND1P4-201ENST00000435196 415 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 snoU13.30-201ENST00000458951 104 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RPL31P58-201ENST00000469001 379 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RNU6-911P-201ENST00000516523 104 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 CBX3P7-201ENST00000532876 502 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 EIF4A1P12-201ENST00000551910 141 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC016727.2-201ENST00000603988 621 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 RPL17P51-201ENST00000605218 238 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC124303.1-201ENST00000605703 360 ntBASIC1.13□□□□□ -2.23
SHANK1Q9Y566 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.13□□□□□ -2.23
SHANK1Q9Y566 ZNF299P-201ENST00000406845 1804 ntBASIC1.12□□□□□ -2.23
SHANK1Q9Y566 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SHANK1Q9Y566 RNU6-1274P-201ENST00000384557 107 ntBASIC1.12□□□□□ -2.23
SHANK1Q9Y566 Y_RNA.533-201ENST00000384596 114 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms